TCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGTTCAGTTCTATAATCCCCTCCCCATTTATTTATTTATTCA
CTAACTTACTTATTTACTCACTTTATATCCCAATCGCTGTCCCCTTTACT
GGTCCCTCCTTCTAGTACCTTCCCCATCCCCTTCCCCCTTCTCCTCTGAA
AGAGTGAAACCCCCCCACCCATACCCCTCTCCACACATCACATCCTGCAG
TGTAGCACTTCTTCTCCACTGAGGCAATACAAGACAGCCAAGTTAGAGGA
ATGGATTCCACAGACAGGCAACAGCTTTAGGAATAGCCCATGCTCCAGTT
GTTTGGGACCCACATGAAGACCATGTNGCGCATTTGCTATGCGTGTGCAT
GCAGATCAGGGAAATGCAAATCATAACAACCCTGAGATTCCACCTCTTTC
CACTTATATGGTTTAATATCCATTATTCTTGTTGATTCTCATGCTGTTGT
GTATGTGNATAAACATGATTTTTCCTCTATTGTTGTTGGGAATACAGGTT
TGTACTACCTCTCCGGATTTTTGTCTTGGGGTTCTTCACCTAAATGCTTG
NNNNNANTATTGTTGGAGTNTGTTTTATGGTTATTGCGGGTTTNNNTATG
ATANTTATCAGCTTGGCTTGATTTTATGTTGCNTCTATNAGTTTCCAGCT
ATGNNTGTTGTTTNCTTAGTCTTAAGTTTAGCCGACTTTTTTATGCTCTC
C

NCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGCATGTGAAATTTGTGGAAGAATTT
AGAGCTTTCTATTANACTTTAGGGAAGGCACATATAACTTAGGAGAGCTA
AGTAGTATAAGTGTCAACCTTGGAGATGAGTATGAGATTTGTTTGTTTGT
TTGTTTGTTTGTGTTATTTTTCCTGTCTTTAATTTAAGATAGGAAACTTA
GATTATGAGCCTCAAGAACAAAGAGTTTCTGTTTCACATGTGTCTGGGAG
ACTCCCCAGTGGTGGCTTTTCAGATGAAGCAGGACTGTTGAGTACATATC
TCTTTGTTCCACCTGAAGATCTATCCCACGAAAGGGACAAGAAAGAACAA
AATGTTCTCACTGCATGAGTCCCCAGTAGCTAATCAGTTAATCTCTTGAA
GTAAGAGAATTCAATCTAGCAATTTCAATCTCAGGACAAACTCTGTAAGA
AGAAAACCCTTGTCACCCCACTTGGTTCACTGACTCAGAACGGCCCACAT
GCCATGTCGTGTTGCCAAATCGAACATCTGCATTTCAGTTGCTGCATGCC
TTTGGCGTTGGCATTGGCCCTCTGACCACAGCGCTTTCTACAGCAGCTGT
TTCAGTGGCTTGGCTTCTTTGTGTTCCCCTAGGTCTTATGGTGTAGCAAG
AGGACACCCACATTGGATTGCCAGAGAGTCATCCTAATGAATGGCTT

Query= MSMg01no354_p11.g1 MSMg01no354_p11.g1 CHROMAT_FILE:
MSMg01no354_p11.g1 PHD_FILE: MSMg01no354_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:17 2005
         (594 letters)



>mm_chr4_81616210_81617203
          Length = 994

 Score = 1108 bits (573), Expect = 0.0
 Identities = 587/594 (98%), Gaps = 4/594 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcatgtgaaatttgtggaagaatttagagctttctattanactttagggaaggcacata 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 928 agcatgtgaaatttgtggaagaatttagagctttctattaaactttagggaaggcacata 869

                                                                       
Query: 61  taacttaggagagctaagtagtataagtgtcaaccttggagatgagtatgagatttgttt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||
Sbjct: 868 taacttaggagagctaagtagtataagtgtcaaccttggagatgagtatgaga----ttt 813

                                                                       
Query: 121 gtttgtttgtttgtttgtgttatttttcctgtctttaatttaagataggaaacttagatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gtttgtttgtttgtttgtgttatttttcctgtctttaatttaagataggaaacttagatt 753

                                                                       
Query: 181 atgagcctcaagaacaaagagtttctgtttcacatgtgtctgggagactccccagtggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 atgagcctcaagaacaaagagtttctgtttcacatgtgtctgggagactccccagtggtg 693

                                                                       
Query: 241 gcttttcagatgaagcaggactgttgagtacatatctctttgttccacctgaagatctat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gcttttcagatgaagcaggactgttgagtacatatctctttgttccacctgaagatctat 633

                                                                       
Query: 301 cccacgaaagggacaagaaagaacaaaatgttctcactgcatgagtccccagtagctaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cccacgaaagggacaagaaagaacaaaatgttctcactgcatgagtccccagtagctaat 573

                                                                       
Query: 361 cagttaatctcttgaagtaagagaattcaatctagcaatttcaatctcaggacaaactct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cagttaatctcttgaagtaagagaattcaatctagcaatttcaatctcaggacaaactct 513

                                                                       
Query: 421 gtaagaagaaaacccttgtcaccccacttggttcactgactcagaacggcccacatgcca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtaagaagaaaacccttgtcaccccacttggttcactgactcagaacggcccacatgcca 453

                                                                       
Query: 481 tgtcgtgttgccaaatcgaacatctgcatttcagttgctgcatgcctttggcgttggcat 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 452 tgtcgtgttgccaaatcgaacatctgcatttcagttgctgcatgcctttggcgttggcgt 393

                                                                 
Query: 541 tggccctctgaccacagcgctttctacagcagctgtttcagtggcttggcttct 594
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 392 tggccctctgaccacagcgcttcctacagcagctgtttcagtggcttggcttct 339


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)