NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAAT
GTTCAGCATCCTTAATCATCAAAGAAATGCAAATCAAAATAACCCTGAGA
TTCCACCTCACACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGACAG
CAGATTCTGGCAAGGATGTGGAGAAAGAGGAATACTCCTCCATTGTTAGT
GGGATTGCAAGATTGTACAACCACTCTGGAAATCAGTCAGGAGGTTTCTC
AGAAAATTAGATATAGTACTACTGGAGGATCCGAAATACCTCTCCTTGGC
ATATATCCAGAAGATGTCTCAACTGGTAAGAAGGACACATGCTCCACCAT
GTTCATAGCAGCCTTATGCCCCTCAACAGAGGAATGGATACAGAAAATAT
GGTACATTTACACAATGGAGTACTACTCAGCTAGTAAAAAGAATGAATTT
ATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACCCAATCACAAAAGAACTCACACAATATGTACTCACTGATAAGTG
TATATTAATCCAGAAACTTAGGATATCCNAGATATAAGATACAATTTGCT
AAACGCATGAACCTCAAGAAGAACGAAGACCAAAGTGTGGAAATTTTGCC
CCTTCTTATAAATGGGAACCAAACACCCCTGGAAGTAATTACAGA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACCTCGAAAAGTTCAAAAACAT
TACAGAAGGAAAGATAACAGTGGGTCACAATGAGGTGAGGCTAGTAGGTG
TGGGAAGACACACAGAGCCAGCAAACCATCAGTGGGTGCAGAAGGTTGAG
CATTATAATTCTGTCATGTGCTTTTGGTGTATATGGTCTCATATCATCAC
TCACACCAAACGTTACTGACAACAACCAGGAAGTAGCAGCCACTTTGGTT
GATAACAAAGTAACAAAATGATAAAATTGACACAGCAAATAGTTTGATGT
ATACTTTTTGATAAGATGTACTCAGAATGAAAAATAGTAGTACTCCTGGC
AACTATAACCTGAGCCTAAGCATGAAGAACAACAGTATTGAATGTGGTTT
CAGTGTCCTTGCCAGGATCTACCTTGAGTTTTCATACGTGATTATTCTAG
TGATGGGGCCTCATTTAGTGTTTTATTTGTTTATTTTCTTTATTTACATT
TCAAATGTTATCCCCTTTCCTGGNTTCCCCTCCTAAAACCCATATCCCTT
CCCCCCCCCCCCCCAGCTCACCAAAATAACCACTCCTAATTCCTAATCCT
GGAATCCCCCACACTCCGCATAAAGCCTTCTCAGGACCAAGGGCCTCCTC
CCCCCTTGGTGACGGAACAGGCCCTTCTTTTGCTTTTTTTTTCCCGGAGC
CCTGGGCCC

Query= MSMg01no355_f18.g1 MSMg01no355_f18.g1 CHROMAT_FILE:
MSMg01no355_f18.g1 PHD_FILE: MSMg01no355_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:47 2005
         (476 letters)



>mm_chr4_18072161_18073036
          Length = 876

 Score =  905 bits (468), Expect = 0.0
 Identities = 474/476 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctcgaaaagttcaaaaacattacagaaggaaagataacagtgggtcacaatgaggtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctcgaaaagttcaaaaacattacagaaggaaagataacagtgggtcacaatgaggtga 260

                                                                       
Query: 61  ggctagtaggtgtgggaagacacacagagccagcaaaccatcagtgggtgcagaaggttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctagtaggtgtgggaagacacacagagccagcaaaccatcagtgggtgcagaaggttg 320

                                                                       
Query: 121 agcattataattctgtcatgtgcttttggtgtatatggtctcatatcatcactcacacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcattataattctgtcatgtgcttttggtgtatatggtctcatatcatcactcacacca 380

                                                                       
Query: 181 aacgttactgacaacaaccaggaagtagcagccactttggttgataacaaagtaacaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 aacgttactgacaacaaccaggaagtagcagccactttggttgataacaaaataacaaaa 440

                                                                       
Query: 241 tgataaaattgacacagcaaatagtttgatgtatactttttgataagatgtactcagaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgataaaattgacacagcaaatagtttgatgtatactttttgataagatgtactcagaat 500

                                                                       
Query: 301 gaaaaatagtagtactcctggcaactataacctgagcctaagcatgaagaacaacagtat 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaaatagtagtactcgtggcaactataacctgagcctaagcatgaagaacaacagtat 560

                                                                       
Query: 361 tgaatgtggtttcagtgtccttgccaggatctaccttgagttttcatacgtgattattct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaatgtggtttcagtgtccttgccaggatctaccttgagttttcatacgtgattattct 620

                                                                   
Query: 421 agtgatggggcctcatttagtgttttatttgtttattttctttatttacatttcaa 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgatggggcctcatttagtgttttatttgtttattttctttatttacatttcaa 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space:   403556
Effective search space used:   403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)