Query= MSMg01no357_l17.b1 MSMg01no357_l17.b1 CHROMAT_FILE:
MSMg01no357_l17.b1 PHD_FILE: MSMg01no357_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:48 2005
(521 letters)
>mm_chr4_45410777_45411697
Length = 921
Score = 938 bits (485), Expect = 0.0
Identities = 497/501 (99%)
Strand = Plus / Minus
Query: 21 atagggtgccctagttaaattccgttgtgtgcttcatcgtggtaagctggtcactgcagg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atagggtgccctagttaaattccgttgtgtgcttcatcgtggtaagctggtcactgcagg 662
Query: 81 ctctgctattctgcttgcttctttgtgctactgctgtcgacagccaaccagtgaggacac 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctctgctattctgcttgcttctttgtgctactgctgtcgacagccaaccagtgaggacac 602
Query: 141 tgtcccttgtgaatagtaactgtcatgtctgtcctgctctctggtactggactttaaaca 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtcccttgtgaatagtaactgtcatgtctgtcctgctctctggtactggactttaaaca 542
Query: 201 aataaacacttccataaagttttatttcaggagttttaatacaaccccaagtcttctttt 260
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 541 aataaacacttccataaagttttatttcaggggttttaatgcaaccccaagtcttctttt 482
Query: 261 tttctggtttctcagtgctacagagtgagctaaggagtggagggtgcttcccctctggcc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttctggtttctcagtgctacagagtgagctaaggagtggagggtgcttcccctctggcc 422
Query: 321 tcccgtctctttctctgggaagaaagatttcagggttctgctactcaggagcccggttgc 380
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 gcccgtctctttctctgggaagaaagatttcagggttctgctactcaggagcccagttgc 362
Query: 381 cactgtgccgtttaggaatgtctgctctaagtagcagccctgacttctggtcaggtagga 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cactgtgccgtttaggaatgtctgctctaagtagcagccctgacttctggtcaggtagga 302
Query: 441 tccaactggcaggaaccaggccaaggagtcacatagctattttctgggtaaatgctgtaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccaactggcaggaaccaggccaaggagtcacatagctattttctgggtaaatgctgtaa 242
Query: 501 tggaaataccatcagtctggg 521
|||||||||||||||||||||
Sbjct: 241 tggaaataccatcagtctggg 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_l17.g1 MSMg01no357_l17.g1 CHROMAT_FILE:
MSMg01no357_l17.g1 PHD_FILE: MSMg01no357_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:48 2005
(478 letters)
>mm_chr4_45263374_45264251
Length = 878
Score = 743 bits (384), Expect = 0.0
Identities = 442/478 (92%), Gaps = 26/478 (5%)
Strand = Plus / Plus
Query: 1 tgcctcaggctcccgggagccggtactgtagttatgtatgtaagacctcaactgttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctcaggctcccgggagccggtactgtagttatgtatgtaagacctcaactgttttaa 260
Query: 61 gtagttgggacacaggcatgcttatgcctaccatacgctgttatagagtaggtattggtg 120
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gtagttggaacacaggcatgcttatgcctaccatactctgttatagagtaggtattggtg 320
Query: 121 catgccggatggcccaagtgcagtgcctgggacctcgatagtgaaaagaaagaaccagta 180
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgcccgatggcccgagtgcagtgcctgggacctcgatagtgaaaagaaagaaccagtt 380
Query: 181 cctccatggtgttttctgactgccgtgtgggcctagtaacatgtgactgtcactgcacac 240
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 cctccatggtgtcttctgactgccatgtgggcctagtaacatgtgactgtcactgcacac 440
Query: 241 acacatacacaggcacatatgcacacgtgagtgcacacaaaataatgtaattaaaaaatt 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 acacatacacaggcacatatgcacacatgagtgcacacaaaataatgtaattaaaaaatt 500
Query: 301 atttttagtactctcattccattcgtttacatctcaaatgatatcccacttcctggttac 360
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 501 atttttagtactctcattccattcatttacatctcaaatgatatcccatttcctggttac 560
Query: 361 ccctccaccaccctcccctcccacatctgccctcccctgtcccctcccctttgcctgttt 420
|||||||||||||||||||||| ||||||||||||
Sbjct: 561 ccctccaccaccctcccctccc--------------------------ctttgcctgttt 594
Query: 421 gaaataagatacaaacaatacggatgactgactattggctattggaggtttcctgtgc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaaataagatacaaacaatacggatgactgactattggctattggaggtttcctgtgc 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
