GGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCATACAATTTACCCTGATCACAGTGGTTTCCCTTTCCTC
CCGGGTATACCTTCCCACCTTGTCACACACCACCCCCAAAAATAAAAACA
GAAATTTCTATTTCCATATGCTCACTGGAGCATGGTCAAACTGGCAATGA
TCAGCCCCTTAAAGATAACTGAGTACTTCTCCCACCCCAGCTCCACCAGA
AGCCACCAATTGTAAAGAGCCACACTTTAGCATCTTTGTCACAATTTTGA
AGGACTCTCTTCAACAGCTTCCCACTGGACTGTTTCTTGGAGAGAAGAGG
GAGGGGAGGAGAGGTTGTCACAGAAGCCTTCAATGTCTCTCATTCTCAGT
TATAAGTCTTCCGTTATCACCTCCACTGCAAAAGAAGCTTCCTTGTCCAT
GACAGACAGAGGCAGCACAGAGCATGGACTTCCACATGGTTTCCAGTGGC
AGCATAGACCACAGACACGGACCATAGAACACACAGCCTCCAGACAGCAA
CAAAGACCAGCCAACATGGTCCCTGGTGGCAGCACGGACCATGGAAACCA
GCACAGCCCTGGCTGCAGCATGGACCACAGACACCAATATGGTCTCCGGT
GGCAGCATATACCGTGGAAATCTTTTTAGGGAGGCTAATTTAAAAAACAA
ACCATTTTTCACCTTGACTATCTTGCTGTTGCACAGAGCACACCCCTT

NNCCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTGTCTACTGTCTCCAACC
TTGAAGAGTTCTTCAGAAGTAAAGGGTCATTTACAGCTTGGCCTTCTTAG
TATTTTTCATTAAGGTCTGTCCAAGAAGAATCTCATTTTATTCTTGATGT
GACTCCTTTCCTTTTAGCTTTTGTGCATGTGCTTTGAGAAATTAAAGGTT
TTAAAATAACTCCCCAAGACATGCTGATAGTTCAAGCACATTAACATAGA
CAAGGAATTAATGTGAAAGCATGAGTAATAGTGAGATACATAGAGTTTGA
TAGCAAATTCCAAAGAATGTGTTGGTGAGGCATCTCATGTCATAGCTCCC
ACTGCTGAGGAGTCACTGCTGGCTGTGTGGTAACTCTTCTCTGTTGAAAA
GACACACCCAAGTCTAGACCAACAATTTCCTTCTGCGTCTACCATCTACA
CAGTGTTCACTGGTTGCCACATTCTTTCAGATAAGCTACTGAACTTCCAT
TTTCTTCTCATCGACATAACATTCTTTTTTAAAGGGAGGAGGGATCTGGC
AGGCCAGGAGAAGAGACTCCACTTTTATGCACATAAGAAGGAGCTGAGAG
AGGAGAACCGATGTGATGGCTGGGTTGGAACATGCAGCANGTACACTTTT
ATTATTTGTGTTGGGGGAAAATGTCTAAAAACAACAAACCCCTGGTTAGA
GAAAGGGCA

Query= MSMg01no361_c05.g1 MSMg01no361_c05.g1 CHROMAT_FILE:
MSMg01no361_c05.g1 PHD_FILE: MSMg01no361_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:05 2005
         (529 letters)



>mm_chr4_16009860_16010788
          Length = 929

 Score =  984 bits (509), Expect = 0.0
 Identities = 524/529 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttttgtctactgtctccaaccttgaagagttcttcagaagtaaagggtcatttacagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttgtctactgtctccaaccttgaagagttcttcagaagtaaagggtcatttacagct 260

                                                                       
Query: 61  tggccttcttagtatttttcattaaggtctgtccaagaagaatctcattttattcttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggccttcttagtatttttcattaaggtctgtccaagaagaatctcattttattcttgat 320

                                                                       
Query: 121 gtgactcctttccttttagcttttgtgcatgtgctttgagaaattaaaggttttaaaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgactcctttccttttagcttttgtgcatgtgctttgagaaattaaaggttttaaaata 380

                                                                       
Query: 181 actccccaagacatgctgatagttcaagcacattaacatagacaaggaattaatgtgaaa 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 actccccaagacatgctgatagctcaagcacattaacatagacaaggaattaatgtgaaa 440

                                                                       
Query: 241 gcatgagtaatagtgagatacatagagtttgatagcaaattccaaagaatgtgttggtga 300
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 441 gcatgagtaatagtgagatacatagagtttgatagcaaattcaaaagaatgtgtcggtga 500

                                                                       
Query: 301 ggcatctcatgtcatagctcccactgctgaggagtcactgctggctgtgtggtaactctt 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 ggcatctcatgtcatagctcccactgctgaggaggcactgctggctgtgtggtaactctt 560

                                                                       
Query: 361 ctctgttgaaaagacacacccaagtctagaccaacaatttccttctgcgtctaccatcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctgttgaaaagacacacccaagtctagaccaacaatttccttctgcgtctaccatcta 620

                                                                       
Query: 421 cacagtgttcactggttgccacattctttcagataagctactgaacttccattttcttct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacagtgttcactggttgccacattctttcagataagctactgaacttccattttcttct 680

                                                            
Query: 481 catcgacataacattcttttttaaagggaggagggatctggcaggccag 529
           ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattgacataacattcttttttaaagggaggagggatctggcaggccag 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)