Query= MSMg01no362_n07.b1 MSMg01no362_n07.b1 CHROMAT_FILE:
MSMg01no362_n07.b1 PHD_FILE: MSMg01no362_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:20 2005
(339 letters)
>mm_chr4_126887325_126888063
Length = 739
Score = 588 bits (304), Expect = e-172
Identities = 329/340 (96%), Gaps = 6/340 (1%)
Strand = Plus / Plus
Query: 1 tggctccactgtgaattcaaagccaggcgggtacgtacaggagaccctgtttaatgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tggctccactgtgaattcaaagccaggcgggtacgtacaggagaccctgtttaataacaa 260
Query: 61 caaacaaggaactcaaaaccaaaaccacaacaaaattcaaaacaaagccaaacaaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaacaaggaactcaaaaccaaaaccacaacaaaattcaaaacaaagccaaacaaacaaa 320
Query: 121 caaacaaacaacaacaacaaaacaacaaaagccctcataatcaccaagcacaatgtggtt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caa-----caacaacaacaaaacaacaaaagccctcataatcaccaagcacaatgtggtt 375
Query: 181 taaaggagattttcttagagctaaggtaacattagctgctataactggatgacttagccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 376 taaaggagattttcttagagctaaggtaacattagctgctataactggatgacttagtcc 435
Query: 241 agtaatgacttagttctttttt-atgccatggcttgaattagttacccatggctacatga 299
||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 436 agtaatgacttcgttctttttttatgccatggtttgaattagttacccatggctacatga 495
Query: 300 tggattgcccaaacaaagagccttaagtgatctgctgctt 339
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 496 tggattgcccaaacaaagagccttaaatgatctgctgctt 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_n07.g1 MSMg01no362_n07.g1 CHROMAT_FILE:
MSMg01no362_n07.g1 PHD_FILE: MSMg01no362_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:20 2005
(429 letters)
>mm_chr4_127070342_127071170
Length = 829
Score = 513 bits (265), Expect = e-149
Identities = 285/293 (97%), Gaps = 4/293 (1%)
Strand = Plus / Minus
Query: 1 aggtagtcctaagtggactcagtgggatttttttttaaaagagcacttataattaggaga 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 aggtagtcctaagtggactcagtgggattttttttttaaagagcacttataattaggaga 241
Query: 61 gaaaggtggttcagggagtagaggaattgaaagaaagaagggggctggcaaggtggctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaaaggtggttcagggagtagaggaattgaaagaaagaagggggctggcaaggtggctca 181
Query: 121 gcaggtaaaagcactgactgttcttctgaaggtcctgagttcaattcccagcaaccacat 180
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcaagtaaaagcactgactgctcttctgaaggtcctgagttcaattcccagcaaccacat 121
Query: 181 ggtgactcacaaccatctgtaatgagatctgacaccctcttctggagtg--tctgaagtc 238
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
Sbjct: 120 ggtgactcacaaccatctgtaatgagatctgacaccctcttctg--gtgcatctgaagac 63
Query: 239 agctacaatatacttatttacaataataaataaatcatatatatatatatata 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agctacaatatacttatttacaataataaataaatcatatatatatatatata 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
