NTTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCATTGTGTCCTGGATGTTTTGTGTTAGGAGTTTTTTGCATTTT
TCATTTTTTTGACTGTTGTGTCAATGTTTTCTATGGAATCTTCTGCCCCT
GAGATTCTCTCTTTCATCTCTTGTATTCTGTTGGTGATGCTTGCATCTAT
TATTCTTTTTTTAATTTCTTTTTTATTTAAAAATTTATTAGATATTTTCT
TTAATTACATTTCAAATATTATCCCCTTTCCTAGTTTCCCCTCTGAAAAT
CCCCTATCCCTTCCCCCCTCTCTATGCTCCTCAACCCACCCACTGTGATT
CCTGGTCCTGGCATGGGCATAGAGTCTTCACAGGACTAAGGGCCTCTCCT
CCCATTGATGACTGACTAGGCCATCCTCTGCTACATATATAGCTAGAGCC
TAAAGTTCCACCATGTGTTTTCTTTGATTGGTAGTATAGTTTCTAGGAAC
TTCTGGTGTACTTGTTTCGGTCTTATTTCATCTACCTATCCTGTTCCTCC
TCTATGCATTTTATAATCCCTCGTCCTCTTTCGTGGTGATTTTTCATTTT
TTCTTTATCTCCCTTCTTCTCCATCTGAACTGTCTCGCCATCCTTATTTC
TATTTTATCTATTTCACTTTTCCTCCCTATCTTCCCACATACCATATCTC
CTCAATCCCCCCTTCTATTTTCTACTCTCTATCATCTTCCCCGTATTAGT
TTAACCTCATAATACTTATACTTTTCACACTTATTTTGCCATGCTGCACC
ACTTTATTATTCCATTTACTCCCT

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATAAAATTAGAAAGTTGTGTGGTAA
TGGTAACCCACATATAAACCACAGCTGACATTGAGTGCTAGCTGACCACA
GAACATCATACAAAGCTATTTACAAATGTAGTGCCATTTAGACTTGATAA
TTACCTCCACTTGAGAAATGAAAAAGTAGAAGTTTGCAGAGATGGAGAAG
CTGCCATCAGTGGGAAACAGCAGGGTCAGTCACTGAATCTGAATATCAGA
ACCCAGAACTCATTACTTGAATTGTTTGACTCTAGTAAGGCATTTATCTA
GTTAGCTCTGAGTGTACAGGATGGCCATAGCTCACAAGTTCCAAGAGCTT
TGTCCATTTCTGGTCACACCATGGGCTAAAGACTGAGGTTGTGAAAGAAA
GAATGTCTTTGCAAAAGGGATTTAGTACCTAAGGGTTAAGAANAGAAACG
CATGCAACACTGGACCTCATCACTATCTTATGGAACTGACAATGACCTTG
TCCTTTCCCAAGCAGCCGTAATGCCAAGAAAGCCAGTGAACGCCTGAATA
TCCAGTTCGCCTTGATTTTCAAGGGCCCCGTCCTGTCCTCGGGAAAGGAA
AAGGGAATGTTTTTAAAAGTTTCCCCAAAAAAATCAAAACCCTTGTGGTG
CCAGAAATGTCCCCAGAAAGATCCTGATTATCCGTGAACCCATAATAAAA
ACCGAACGTATCGGTTCTTTTTCG

Query= MSMg01no364_m13.g1 MSMg01no364_m13.g1 CHROMAT_FILE:
MSMg01no364_m13.g1 PHD_FILE: MSMg01no364_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:02 2005
         (492 letters)



>mm_chr4_8203889_8204780
          Length = 892

 Score =  946 bits (489), Expect = 0.0
 Identities = 491/492 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataaaattagaaagttgtgtggtaatggtaacccacatataaaccacagctgacattgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaattagaaagttgtgtggtaatggtaacccacatataaaccacagctgacattgag 260

                                                                       
Query: 61  tgctagctgaccacagaacatcatacaaagctatttacaaatgtagtgccatttagactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctagctgaccacagaacatcatacaaagctatttacaaatgtagtgccatttagactt 320

                                                                       
Query: 121 gataattacctccacttgagaaatgaaaaagtagaagtttgcagagatggagaagctgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gataattacctccacttgagaaatgaaaaagtagaagtttgcagagatggagaagctgcc 380

                                                                       
Query: 181 atcagtgggaaacagcagggtcagtcactgaatctgaatatcagaacccagaactcatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcagtgggaaacagcagggtcagtcactgaatctgaatatcagaacccagaactcatta 440

                                                                       
Query: 241 cttgaattgtttgactctagtaaggcatttatctagttagctctgagtgtacaggatggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgaattgtttgactctagtaaggcatttatctagttagctctgagtgtacaggatggc 500

                                                                       
Query: 301 catagctcacaagttccaagagctttgtccatttctggtcacaccatgggctaaagactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catagctcacaagttccaagagctttgtccatttctggtcacaccatgggctaaagactg 560

                                                                       
Query: 361 aggttgtgaaagaaagaatgtctttgcaaaagggatttagtacctaagggttaagaanag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 aggttgtgaaagaaagaatgtctttgcaaaagggatttagtacctaagggttaagaaaag 620

                                                                       
Query: 421 aaacgcatgcaacactggacctcatcactatcttatggaactgacaatgaccttgtcctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacgcatgcaacactggacctcatcactatcttatggaactgacaatgaccttgtcctt 680

                       
Query: 481 tcccaagcagcc 492
           ||||||||||||
Sbjct: 681 tcccaagcagcc 692


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space:   425124
Effective search space used:   425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)