Query= MSMg01no366_a07.b1 MSMg01no366_a07.b1 CHROMAT_FILE:
MSMg01no366_a07.b1 PHD_FILE: MSMg01no366_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:43 2005
(550 letters)
>mm_chr4_75663712_75664664
Length = 953
Score = 1011 bits (523), Expect = 0.0
Identities = 542/549 (98%), Gaps = 3/549 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttcagtggtagtttgtaattctc--tattactgcaatggacaagaagaaagc 61
||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 752 ggaattctttcagtggtagtttgtaattctctatattactgccatggacaagaaggaagc 693
Query: 62 attgaatttttattttctgatccagaaaacaaggtattgattaaacattaacaaaagtct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 attgaatttttattttctgatccagaaaacaaggtattgattaaacattaacaaaagtct 633
Query: 122 tatttttcagttttgaagtttatctgttttttatgagaaaggataaatgatttaacacaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tatttttcagttttgaagtttatctgttttttatgagaaaggataaatgatttaacacaa 573
Query: 182 agcaaaagataatg-aaaaaaaaaccttcctaataaatggcaagcaagaacaatactgaa 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agcaaaagataatgaaaaaaaaaaccttcctaataaatggcaagcaagaacaatactgaa 513
Query: 241 aggctaaggcgcattttgactccatgatgcaaagtaaaatagactgatgtttccagtccc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aggctaaggtgcattttgactccatgatgcaaagtaaaatagactgatgtttccagtccc 453
Query: 301 attagaacattctacattttatgaacaattaataccattgatagagtccgctaatgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 attagaacattctacattttatgaacaattaataccattgatagagtccgctaatgtctt 393
Query: 361 ttacaaacctcattatggtttgtttctgctagtttcccttaaagtgttgtatgttccttg 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttacaaacctcattatggtttgtatctgctagtttcccttaaagtgttgtatgttccttg 333
Query: 421 ctttaatgatatgaatcacagtaatcatgaaatcaagacatccattcatcattgctcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctttaatgatatgaatcacagtaatcatgaaatcaagacatccattcatcattgctcttc 273
Query: 481 ccttttacagtctactaatgttctgttttttaagaatgggcaggtctccattatcaagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ccttttacagtctactaatgttctgttttttaagaatgggcaggtctccattatcaagta 213
Query: 541 gaaacagaa 549
|||||||||
Sbjct: 212 gaaacagaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 953
Length adjustment: 10
Effective length of query: 540
Effective length of database: 943
Effective search space: 509220
Effective search space used: 509220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_a07.g1 MSMg01no366_a07.g1 CHROMAT_FILE:
MSMg01no366_a07.g1 PHD_FILE: MSMg01no366_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:43 2005
(474 letters)
>mm_chr4_75638398_75639271
Length = 874
Score = 888 bits (459), Expect = 0.0
Identities = 462/463 (99%)
Strand = Plus / Plus
Query: 12 gactacattttacaaactaattgacaattcaaatcatatctcatttgttgcctgtcaaaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gactacattttacaaactaattgacaattcaaatcatatctcatttgttgcctgtcaaaa 271
Query: 72 tttctctccttatctctaacacttagagcattaagtcacatccaaataactctatctaac 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tttctctccttatctctaacacttagagcattaagtcacatccaaataactctatctaac 331
Query: 132 tcagtcatttcccactatgaggcttcaataccaacaggttcaactaatagctattaacca 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcagtcatttcccactatgaggcttcaataccaacaggttcaactaatagctattaacca 391
Query: 192 aggctgggttctgagaccaagtgcaagacagatatcctctaaatctcttcacagatacca 251
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 392 aggctgggttctgagaccaagtgtaagacagatatcctctaaatctcttcacagatacca 451
Query: 252 tagcctctaacattcagtaaggataccccagcattttctaagcaggcttcttcagtccct 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tagcctctaacattcagtaaggataccccagcattttctaagcaggcttcttcagtccct 511
Query: 312 gtcttatctacctcaagatggtagataaaatagaaatcagccagccaaaagcacacagag 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtcttatctacctcaagatggtagataaaatagaaatcagccagccaaaagcacacagag 571
Query: 372 gaagaaaaaagttaaaatgtagacagtcatccagggattaagggcgtttcctgagccagg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaagaaaaaagttaaaatgtagacagtcatccagggattaagggcgtttcctgagccagg 631
Query: 432 aatcaccttggccaatcgtaccttggagactcattcttcgggg 474
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aatcaccttggccaatcgtaccttggagactcattcttcgggg 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
