Query= MSMg01no366_j14.b1 MSMg01no366_j14.b1 CHROMAT_FILE:
MSMg01no366_j14.b1 PHD_FILE: MSMg01no366_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:29 2005
(455 letters)
>mm_chr4_22550407_22551261
Length = 855
Score = 841 bits (435), Expect = 0.0
Identities = 450/455 (98%)
Strand = Plus / Minus
Query: 1 taaatttccagtttaaaaaaaaatgacaactcatattttaaacagagaacagacaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 taaatttccagtttaaaaaaaaatgacaactcatattttaaacagagaacagacaaacaa 596
Query: 61 acagagggtcagtcatcctgaaatatacagttacctggaaactctgaaatgttatctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acagagggtcagtcatcctgaaatatacagttacctggaaactctgaaatgttatctcca 536
Query: 121 aaactcttttcaaaatattttaacagtttcttatttacatcttacgtttattattaaata 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 535 aaactcttttcaaaatattttaacagtttattatttacatcttacgtttattattaaata 476
Query: 181 aatgtaaagtgaccagttaattttaactatgaatggatcacagatgtaacctaagaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aatgtaaagtgaccagttaattttaactatgaatggatcacagatgtaacctaagaaagt 416
Query: 241 ctctctcctcttttcctgctcatatgttcacaaatggctttgttagtcttttttccatct 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctctctcctcacttcctgctcatatgttcacaaatggctttgttagtcttttttccatct 356
Query: 301 agcacacaggtagcagggtacagcatacttaatacagagaactgaagggttttttagtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agcacacaggtagcagggtacagcatacttaatacagagaactgaagggttttttagtga 296
Query: 361 accttatgaaaagatacacttgtgcactgttttctattttttccctttacagaagctgta 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accttatgaaaagatacactcgtgcactgttttctattttttccctttacagaagctgta 236
Query: 421 tattttaaggaataataggcagaattactaaacac 455
|||||||||||||||||||||| ||||||||||||
Sbjct: 235 tattttaaggaataataggcagtattactaaacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_j14.g1 MSMg01no366_j14.g1 CHROMAT_FILE:
MSMg01no366_j14.g1 PHD_FILE: MSMg01no366_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:29 2005
(461 letters)
>mm_chr4_22371585_22372445
Length = 861
Score = 862 bits (446), Expect = 0.0
Identities = 458/462 (99%), Gaps = 2/462 (0%)
Strand = Plus / Plus
Query: 1 tatgccattggatatatttggagaaacaaaaagaaaaataattctgaaacatattcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgccattggatatatttggagaaacaaaaagaaaaataattctgaaacatattcagta 260
Query: 61 attatctgaagaaaatgaagactaaagagatgcttggaaaaactgtatggagaagcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attatctgaagaaaatgaagactaaagagatgcttggaaaaactgtatggagaagcaaat 320
Query: 121 tctttgtgctgaaatctaacataaatatgtcaattgtcaggccattgtatgtttgtgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctttgtgctgaaatctaacataaatatgtcaattgtcaggccattgtatgtttgtgggc 380
Query: 181 ttgtacgttattttttgaaaag-cccctatgtttccattgtttgaagtttttcattgact 239
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtacgtta-tttttgaaaagccccctatgtttccattgtttgaagtttttcattgact 439
Query: 240 ttgaaaattgtatccctagataaattgtgacatttcctttctacatgttggcccagtttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 ttgaaaattgtatccctagataaattgtgacatttcctttctacatgttggcccaatttt 499
Query: 300 acattttggaattgtcagatagattcattactcctatttctaaacacaaatgaccataat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acattttggaattgtcagatagattcattactcctatttctaaacacaaatgaccataat 559
Query: 360 tcaactatgtatcatgtagcaggctctgagctacataaaaacattctatcactaatatac 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaaatatgtatcatgtagcaggctctgagctacataaaaacattctatcactaatatac 619
Query: 420 ttggaggcacattgatatttatatatgcacttttataaggaa 461
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttggaggcacattgatatttatatatgcacttttataaggaa 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
