NCGCTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTATATATTTTGGAAATTAGCCCTCTATCAAATGTG
GGGTTTGTGAGGAAATTTTCCCCAATATGTAGGCTGTGATTTCTCCTATT
GACTGTGTCTTTTTGCTGCCTTACAGAAGCTGTTCAACTTCATTGAAGTC
CTATTTATCAATTGCTGGTCTTAGAGCCTGAGCCATTGGATTTCTGTGAC
AATGAGTTGTAGACTCTTTCCCATTTTCTCTATTAGATTCAATATGTCTG
GTTTTATGTAGAGGTCCTTGATTCACTTGGACTTGGTCTTTGTAAAAGGT
GAAAAATATGAATCAATTTTCATTTTTCTACATACAGACTGCCAGTTTAA
CCAACATCATTTATTGAAGATGCTTTCTTTTTCCAATTGTAAGTTTTTGG
CTTCTATGCCAAAGATTAAGTGTCCATAAGTATGTGGGTTTATTTCTGTG
TAATTAGTTCTATTCAATTTATCAACACATCTGTCCCTATACCAATACCA
TGTGGTTTTTATCACTATTACTCTGTAATACAGCTTGATGTCAGGGATCA
TGGTTCCCCCAGAAGTTCTTTTGGCGTTAAGAATTGCTTTCACTATCTTG
GGGTTTTTGACTTTGATATGACCCGCAACTCTGTATGACAATTTACCTAT
GCTCCTTCCTCGTCTTGTATACATATCTGTCGCAACTTTACT

TGAGAGGGAGAGGGTGTAGGGTAGGGTAGTAGAGTTGTTAGTGAGGTAGT
TAGGATGTGGTGNNGGGTTTGANCCCCCTATGATAXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXAAAAGCTTTCCCCTCAGAGCACCTTATGATTGGGGTCACTCAGCAGGT
GTCTTCACATTGTAAGATGCCTCTCCCTGTGTCAGTTGGTATAGTCTAGA
TAATCCCTCACAAGCAGAACTGAAGAACTGTCTCATGGGTGAGTCTAGAC
TCTAAAACTGACAATATTAACCTTCACGGTTGGCTTAAGAGGAAAGATTC
AGGTCAGAACTACTTTGTTCCAAATGAATTTCAGTCCAAAGTTCTATGAT
TTCCTGGTTACACTTAATCCCTCCTTTTTATAGCCCATCTCATTGATCTG
CACATGCACTGGCATGGCCCTGTCACTTTGCAACCTGGTACCTTTATAAT
AAATCTTAAAATCACAGAATATTACTTTGCATTTTTTTAGCTTTACTTTC
TTTATTCTCCCATTTGTGCATTCTCAATTCTTTTTTTTTTTTAGGAGTAG
AATTTACTGTTTTTACTATTACAGTCAGATACAATTCATTTTTTGTTGTA
CTATTTATGTATTTCTTTTCCCTTTTTTTACTACTGTACTTAGCCTCATC
TTACTTTTTCCCATGGTTATACCCAAAAGCGCTCCCCCTATTCCTCCTTT
TTCCTATTTTCTTCTATCTTACCTTTTCCTCTCTCTTATATTATGCTATC
TCTGATTGACGCTATCTTTTGNATATTGCCTCTCCACAAATG

Query= MSMg01no367_a02.g1 MSMg01no367_a02.g1 CHROMAT_FILE:
MSMg01no367_a02.g1 PHD_FILE: MSMg01no367_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:02 2005
         (466 letters)



>mm_chr4_51787716_51788581
          Length = 866

 Score =  808 bits (418), Expect = 0.0
 Identities = 427/430 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaagctttcccctcagagcaccttatgattggggtcactcagcaggtgtcttcacattg 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaaagctttcctctcagagcaccttatgattggggtcactcagcaggtgtcttcacattg 746

                                                                       
Query: 61  taagatgcctctccctgtgtcagttggtatagtctagataatccctcacaagcagaactg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taagatgcctctccctgtgtcagttggtatagtctagataatccctcacaagcagaactg 686

                                                                       
Query: 121 aagaactgtctcatgggtgagtctagactctaaaactgacaatattaaccttcacggttg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagaactgtctcatgagtgagtctagactctaaaactgacaatattaaccttcacggttg 626

                                                                       
Query: 181 gcttaagaggaaagattcaggtcagaactactttgttccaaatgaatttcagtccaaagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcttaagaggaaagattcaggtcagaactactttgttccaaatgaatttcagtccaaagt 566

                                                                       
Query: 241 tctatgatttcctggttacacttaatccctcctttttatagcccatctcattgatctgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctatgatttcctggttacacttaatccctcctttttatagcccatctcattgatctgca 506

                                                                       
Query: 301 catgcactggcatggccctgtcactttgcaacctggtacctttataataaatcttaaaat 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catgcactggcacggccctgtcactttgcaacctggtacctttataataaatcttaaaat 446

                                                                       
Query: 361 cacagaatattactttgcatttttttagctttactttctttattctcccatttgtgcatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacagaatattactttgcatttttttagctttactttctttattctcccatttgtgcatt 386

                     
Query: 421 ctcaattctt 430
           ||||||||||
Sbjct: 385 ctcaattctt 376


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)