TTTTCAAGAGGATGGGCGGAATTCTGTAGTTTCTAGAAATTACATCCCAC
AAGTACGATGTGCATTTTAGAAATCAATTAGCACAATTGCCAGTTGGCAG
CCACTATCTAGAAAAGTCGAGCACTGCTGTCTCCTCTGTTTTCAAAACTG
AGGCGTTGCTATCAGGCCTCACATGGAGAGCGCAGGACCAGGAATGGCCC
CTGTTTCAGTCCTTCAAATTCACTTCTGGTGCCAATTTTCAATTGCACAG
CTAAGCATCTTCCTGGAAGAACTAATGTTGCTTGTATTTGTTTATCTTTG
CGGGTACTCGCTGTAGCCCTCTGAATCCCTGACAAGGTTCTCACTCAACT
GAATGAATGACAGCACTTGTCTACAGAGCCTTATGCCATTGTGAACGTTC
AGGTTTGTTTTCAGAACCAATCGTAACTTCCATACTCACCCCAAGGACAC
TTTAGGTCATGAATGAAGCTTTCATTCATGTTACTGAGTCAGTCATGTTT
GCTCAGCCATTGCAAATTTCCCTTACATGGGATTGAAGAATATAAGGCAG
ATGTTGTGCATTGTGTGCTTCACAGAATATGTACAAAATACTTGGTAGTG
AAAGCAGTAGTTTTCATGTGATCATTATTGCTTTGCAGCCATTTGAGAAT
GGACAGCCTTTCCTTTAGGGTTGCAGGACAAGTTCCCTTTTTA

TTCCTTCGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTATATTGAACTATCCC
CGCATCCCTGGGATGAAGCCTACTTGATCCTGGTAAATGATTGTTTTGAT
GTGCTCATGGATTCAGTTTGTGAGAAAAATTTTTTAAGTATTTTTACACT
GATATGCATAAGCAAATTTGGTCTGAAGCTCTCTCTTTCTTCTATCTTTG
TGTGGTTTAGTTATCAGCATAGCTGTGGTGTCATAGAATGAATTAGTGTT
CCTTCTCTTGCTGTTTTGTGGAATAGTTTAAGAAGTATTGGTATTAGGTG
TTCTTTAAAGGTCTCATTGAATTCTGCACTAAACCCATCTGGCCCTGAGA
TTTTTTTTGGTGACTGGAGATTGGAACACTTTTACTGACTGCTTCTATTT
CCTTGGGAGTTACAGGACTGTTTTGAGGTTTAGCTGATACTGATTTAACT
TTGGTACCTGGTATCTGTCTAGAAAATCGTCCACTTCTTCTATAGTTTCT
ATTTCTGTTGAGTATAGCCTTTTTGCACTATGATCTGATTATTCTTTTTT
TAATTTCCTCATTTCTCTGTTGCTATGCTCTCCCTTTTTCTCTATTGACC
TCCAGACAATTTGGTTACTTGTTTCCTGTGCCTCTTATGTTTTATTCGCT
CCAATATTTTTGTTTTATCTCTTTCCACTTTTCTCCTACCA

Query= MSMg01no367_o05.b1 MSMg01no367_o05.b1 CHROMAT_FILE:
MSMg01no367_o05.b1 PHD_FILE: MSMg01no367_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:10 2005
         (447 letters)



>mm_chr4_20069819_20070665
          Length = 847

 Score =  795 bits (411), Expect = 0.0
 Identities = 438/447 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggcagccactatctagaaaagtcgagcactgctgtctcctctgttttcaaaactgagg 60
           ||||||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||
Sbjct: 201 ttggcagccactatctagaaaagtcgagcactgctgtgtcttctgttctcaaaaccgagg 260

                                                                       
Query: 61  cgttgctatcaggcctcacatggagagcgcaggaccaggaatggcccctgtttcagtcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgttgctatcaggcctcacatggagagcgcaggaccaggaatggcccctgtttcagtcct 320

                                                                       
Query: 121 tcaaattcacttctggtgccaattttcaattgcacagctaagcatcttcctggaagaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaattcacttctggtgccaattttcaattgcacagctaagcatcttcctggaagaact 380

                                                                       
Query: 181 aatgttgcttgtatttgtttatctttgcgggtactcgctgtagccctctgaatccctgac 240
           ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgttgcttgtaattgaatatctttgcgggtactcgctgtagccctctgaatccctgac 440

                                                                       
Query: 241 aaggttctcactcaactgaatgaatgacagcacttgtctacagagccttatgccattgtg 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggttctcacccaactgaatgaatgacagcacttgtctacagagccttatgccattgtg 500

                                                                       
Query: 301 aacgttcaggtttgttttcagaaccaatcgtaacttccatactcaccccaaggacacttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacgttcaggtttgttttcagaaccaatcgtaacttccatactcaccccaaggacacttt 560

                                                                       
Query: 361 aggtcatgaatgaagctttcattcatgttactgagtcagtcatgtttgctcagccattgc 420
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 aggtcatgaatgaagctttcattcatgttcctgagtcagtcatgtttgctcagccattgc 620

                                      
Query: 421 aaatttcccttacatgggattgaagaa 447
           |||||||||||||||||||||||||||
Sbjct: 621 aaatttcccttacatgggattgaagaa 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)