Query= MSMg01no368_c12.b1 MSMg01no368_c12.b1 CHROMAT_FILE:
MSMg01no368_c12.b1 PHD_FILE: MSMg01no368_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:31 2005
(598 letters)
>mm_chr4_29416935_29417932
Length = 998
Score = 1143 bits (591), Expect = 0.0
Identities = 594/595 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgtgtcctcctctgagctcttcaggtattagacatgtagggggtatagatatc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtgtcctcttctgagctcttcaggtattagacatgtagggggtatagatatc 263
Query: 64 ggcatactggaaagcactcgtaaataaaataaataaattgtatcgatattaaaaggaact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggcatactggaaagcactcgtaaataaaataaataaattgtatcgatattaaaaggaact 323
Query: 124 aaaagattaattaagttgtctgcatacttgtcatgcacctacttgtgaaggaggaaagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaagattaattaagttgtctgcatacttgtcatgcacctacttgtgaaggaggaaagaa 383
Query: 184 ggaagacgactattgccattcagaaaagcattgcccagttaatgcctctggtcatcagta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaagacgactattgccattcagaaaagcattgcccagttaatgcctctggtcatcagta 443
Query: 244 ttatttgatgatatctccccaagggagctcatttcaaattcatcagatgatctgcattaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatttgatgatatctccccaagggagctcatttcaaattcatcagatgatctgcattaa 503
Query: 304 gtcagagatgaaagctttgtacaccccagtaatctagactctgggaaggaactgcacatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcagagatgaaagctttgtacaccccagtaatctagactctgggaaggaactgcacatt 563
Query: 364 aatccttctttcagcaaacgagctgcagcccgcacaattctgaattctggacttagcacg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatccttctttcagcaaacgagctgcagcccgcacaattctgaattctggacttagcacg 623
Query: 424 aacaaggctgacttggttgataaccttggttctgttgacaagtttgggaccaaagtcaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aacaaggctgacttggttgataaccttggttctgttgacaagtttgggaccaaagtcaaa 683
Query: 484 ctttgcaggctggtgatgaaacctcttccatgagccattattttcccgctttacatattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctttgcaggctggtgatgaaacctcttccatgagccattattttcccgctttacatattt 743
Query: 544 ggttgctgagaaagttactgtggtccccaatcataacgatgatgagcactatggc 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggttgctgagaaagttactgtggtccccaatcataacgatgatgagcactatggc 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_c12.g1 MSMg01no368_c12.g1 CHROMAT_FILE:
MSMg01no368_c12.g1 PHD_FILE: MSMg01no368_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:31 2005
(398 letters)
>mm_chr4_29578198_29578997
Length = 800
Score = 673 bits (348), Expect = 0.0
Identities = 370/380 (97%), Gaps = 6/380 (1%)
Strand = Plus / Minus
Query: 1 tccactgcttctccagaactctgtcttgggctgtcatccttcccaccatgataataatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tccactgcttctccagaactctgtcttgggctgtcatccttcccaccatgataataatgg 646
Query: 61 actatagctttgaaactgtaagcaagcctccaactaaatgttttcttttaaaggagttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 actatagctttgaaactgtaagcaagcctccaactaaatgttttcttttaaaggagttgc 586
Query: 121 ctagtcgtatcattgttcaatcatatcaatggaataatgactaagaagtaatgaaatttt 180
|||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 585 ctagtcatatcatcgt----tcatatcaatggaataatgactaagaattaatgaaatttt 530
Query: 181 ttcttattgaaaatttattattatcacattaaagttttcattggttgcttatgtgaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttcttattgaaaatttattattatcacattaaagttttcattggttgcttatgtgaatag 470
Query: 241 tttatcagatgccataaatactgtatttgagtcattgcaaactgtctgcaatcatgt--t 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 469 tttatcagatgccataaatactgtatttgagtcattgcaaactgtctgcaatcatgtgtt 410
Query: 299 tttctctttttcatagcacaataaccataagttccaaattgtatgtatgtatgtatgtat 358
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 409 tttctctttttcatagcacaataaccataagttccaaattgtatatatgtatgtatgtat 350
Query: 359 atatatatatatatatatat 378
||||||||||||||||||||
Sbjct: 349 atatatatatatatatatat 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 800
Length adjustment: 9
Effective length of query: 389
Effective length of database: 791
Effective search space: 307699
Effective search space used: 307699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
