Query= MSMg01no372_a08.b1 MSMg01no372_a08.b1 CHROMAT_FILE:
MSMg01no372_a08.b1 PHD_FILE: MSMg01no372_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:41 2005
(571 letters)
>mm_chr4_34552656_34553625
Length = 970
Score = 977 bits (505), Expect = 0.0
Identities = 553/573 (96%), Gaps = 9/573 (1%)
Strand = Plus / Plus
Query: 6 ggaattcaggatgttacttctgcagaaagtcaactaggttatcaaacagatttccattta 65
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 200 ggaattcaggatgggacttctgcagaaagtcaactaggttatcaaacagattttcattta 259
Query: 66 attcctcctgtaattgctgcaaagaaaacaaaatttcatgagttattagtagttgtattt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attcctcctgtaattgctgcaaagaaaacaaaatttcatgagttattagtagttgtattt 319
Query: 126 cttttctttcctggtgtagtttttaattttttcttttccctttgaatgttcagtaatttt 185
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 cttttctttcctggtgtagtttttaattttt-cttttccctttgaatgttcagtaatttt 378
Query: 186 agttgatgagataaagcagcaatagagcaaccgggtaaaaaaaccccacagatgccaggc 245
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 379 agttgatgagataaagcagcaatagagcaaccgggtaaaaaa-ccccacagatgccaggc 437
Query: 246 agtggtggcgcatgcctttaataccagcacttgggaggcagagacaggcagatttctgag 305
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 438 agtggtggcgcatgcctttaatcccagcacttgggaggcagagacaggcggatttctgag 497
Query: 306 ttcgaggccagcttggtctacaaagtgagttccaggacagccagggctacacaaagaaac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 498 ttcgaggccagcttggtctacaaagtgagttccaggacagccagggctacacagagaaac 557
Query: 366 cccatctcaaaaaactcaaaaactcaaaaa-------aaaaaaaaaaaaatccccacaga 418
|| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 558 cctgtctcaaaaaactcaaaaactcaaaaactcaaaaaaaaaaaaaaaaatccccacaga 617
Query: 419 tatcaacacaaaatggtcagcacaaactgtattgaaagggaagagaagagggggaaacct 478
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tatcaacacacaatggccagcacaaactgtattgaaagggaagagaagagggggaaacct 677
Query: 479 atagactgtattaacacacaacaagcagaaacaatgtattggaaggggacagaatgggat 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 atagactgtattaacacacaacaagcagaaacaatgtattggaaggggacagaatgggac 737
Query: 539 atgcacacatatcttgacacacagtgagcaagc 571
|||||||||||||||||||||||||||||||||
Sbjct: 738 atgcacacatatcttgacacacagtgagcaagc 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_a08.g1 MSMg01no372_a08.g1 CHROMAT_FILE:
MSMg01no372_a08.g1 PHD_FILE: MSMg01no372_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:41 2005
(126 letters)
>mm_chr4_34754808_34755332
Length = 525
Score = 236 bits (122), Expect = 4e-67
Identities = 125/126 (99%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 1 tgatttgcagatttctgaagataatgttattcagaactttgagaagactcttgaaattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgatttgcagatttctgaagataatgttattcagaactttgagaagactcttgaaattat 266
Query: 61 taaaactgctatgaattctcaaatacttgaggtaaaaagtggatctcagggtactgggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 taaaactgctatgaattctcaaatacttgaggtaaaaagtggatctcagggtact-ggtg 207
Query: 121 agacaa 126
||||||
Sbjct: 206 agacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 525
Length adjustment: 8
Effective length of query: 118
Effective length of database: 517
Effective search space: 61006
Effective search space used: 61006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
