Query= MSMg01no376_a11.b1 MSMg01no376_a11.b1 CHROMAT_FILE:
MSMg01no376_a11.b1 PHD_FILE: MSMg01no376_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:49 2005
(526 letters)
>mm_chr4_16737577_16738502
Length = 926
Score = 656 bits (339), Expect = 0.0
Identities = 358/367 (97%), Gaps = 5/367 (1%)
Strand = Plus / Minus
Query: 112 cccagagaaaagcacaccaattgtttacctaataccaaatgatctgttctaaa-----at 166
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 926 cccagagaaaagcacaccaattgtttacctaataccaaatgatctgttctaaaaacatat 867
Query: 167 atacctataacattatatagactgaataggttacatttagaaatatttatgtattataca 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 atacctataacattatatagactgaataggttacatttagaaatatttatgtattataca 807
Query: 227 tattcatatatgcaaataacagcaattaataaagcaagaatccatggatttaaaagagag 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tattcatatatgcaaataacagcaattaataaagcaagaatccatggatttaaaagagag 747
Query: 287 caataataattatgtatgaggttggaaggaagaaaagaaagaaggaaataatgtgattgt 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 caataataattatgtatgaggttggaaggaagaaaagaaagaaggaaataatgtgattgt 687
Query: 347 attataatctaaatttttaagatggaaaattgagaggatatgtaagaaatacaatagttt 406
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 686 attataatctaaatttttaggatggaaaattgagaggatatgaaagaaatacaatagttt 627
Query: 407 tctgtttttgttatttttcctagaagtcattttctagctataattgtttgttaaaaagag 466
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 626 tctgtttttgttatttttcctagaagtcattttctagctaaaattgtttgttaaaaagaa 567
Query: 467 atcacta 473
|||||||
Sbjct: 566 atcacta 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_a11.g1 MSMg01no376_a11.g1 CHROMAT_FILE:
MSMg01no376_a11.g1 PHD_FILE: MSMg01no376_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:49 2005
(487 letters)
>mm_chr4_16643891_16644777
Length = 887
Score = 919 bits (475), Expect = 0.0
Identities = 484/487 (99%)
Strand = Plus / Plus
Query: 1 attgacattctggaacacaggctatttttgtgttgcttatgaagtttggaaattggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgacattctggaacacaggctatttttgtgttgcttatgaagtttggaaattggttct 260
Query: 61 gactgatcaacagtgaaacatgtggaagattccaatctgtttgttgtgtatatacagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgatcaacagtgaaacatgtggaagattccaatctgtttgttgtgtatatacagagt 320
Query: 121 ttagacaatggtagtttatatagagatttgaacttttttatatccttataagtgactcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagacaatggtagtttatatagagatttgaacttttttatatccttataagtgactcct 380
Query: 181 tataagtgacacaattactggggaaggaaagaagataagtaagaaacacttcaattgaca 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tataagtgacacaattactggggaagcaaagaagataagtaagaaacacttcaattgaca 440
Query: 241 tatatttatccaatgaaaaagaaaagatttttttgttttgtgttttgttttgttttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatttatccaatgaaaaagaaaagatttttttgttttgtgttttgttttgttttgttt 500
Query: 301 tcgcctgcatttgaatgaagcaaaactaagttatcctgtcaggaatgattcgatgctcac 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcgcttgcatttgaatgaagcaaaactaagttatcctgtcaggaatgattcgatgctcac 560
Query: 361 tgtaagtcgttttcctcctcactctcccttctacctctctctttctctacatccatttcc 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtaagtcgttttccacctcactctcccttctacctctctctttctctacatccatttcc 620
Query: 421 tactacaacacatgtttttatccctttagccccctagggaaaaaaaaagtcctcacacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactacaacacatgtttttatccctttagccccctagggaaaaaaaaagtcctcacacag 680
Query: 481 tgagtgc 487
|||||||
Sbjct: 681 tgagtgc 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
