GGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC
TTTTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTC
ATGAGGTCCCGTTTGTCAATTCTCCATCTTACAGCACAAGCCATTGCTGT
TCTATTCAGGAATTTTTCCCGTAAAATATCCTTTACCACAGCCTAAAATG
ATATAAAATATCTCATTGTAACTCAAATTAAGCAAATGAAAGACCTGTAT
GACAAGTACGTCAAATCTTTGAAGAAAAAAATTGAAGAAGATATCAGAAA
ATCGAAAATTGCCCCGTTCTAAGGGATCAGTAGGATTAACATATCAAAAA
AAAAATTACTATCCTACTAAAACCTATATACAGATTCAATTTAATTCCCA
TCAAAATTTCAATGCAATTATTCACAGATTTTTGGAAGGATCATTTTCAA
TTCTTATGGAAACAGAGAAAATCCAGGATTTGTTAACAATCCTAAAGAAA
TAATGAATTGAGCGAGGTCTCCCCACTTCTGTATTCTCGCTTTACTAACA
AACTCTGGCCATATAAATACCATGTTCATCGCCCCAAAAATTTTGCCCAT
TAAT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACCTTTAAGGGACTGCTTTTCCT
GGTCTATAGAGGAGAGTAAAAACAGCTGTATAGTGTGTTTTGTCTTGAGA
GGGAAAAATCAGATAAGCATCAAGAAACCTTATTCAAATAATAACTCCAG
CTTCAGCTAACCTGCCAACAATGCCAAATTTCCTTTTTGCATGCTCAGTT
CCTCTTCTGAATGAAGACCTAGCTATGTAGGAATGAGCCATATTTTAGGT
AGGTTAACTAAAATTTGAGAACATTCTGTTCTCTTGTGATGAGGTAGTGT
TCAATATACAGAAGATCAGGTGGTTCACATGTCGTTCTTGTTCAGGAGAG
CATCTTTGTGGTGAATAGCTCTCCAATGTTGAGAATGGGACTAACTGTAT
TTCTAATTTTGTGACAAAATACCTGAGATAATCAAGTTACAAAAAGAAAA
GGGTTTATTTTGACTCATAGTTCTGGAGATTGTGATATTTGTGAGAATGT
AAAAGGAAAAAACACCTCTGAAATTATAAACCATGGAACAAACAAGGAAA
AGGAAGAAACGGGGACCCTACTTCTAAGTTGCCATCACTTTTATGCCCTT
TCCTGGGGGAGACTCCGCATCTCAGGTACAAAGAGCTAGTGACCTACTGA
AATTTTCTTCCAAGCCCCAAACCGGCGCCGAGAAAATAAATATGCCCGTT
AAACATTTTGGGAAAA

Query= MSMg01no377_d14.g1 MSMg01no377_d14.g1 CHROMAT_FILE:
MSMg01no377_d14.g1 PHD_FILE: MSMg01no377_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:20 2005
         (470 letters)



>mm_chr4_7317057_7317926
          Length = 870

 Score =  893 bits (462), Expect = 0.0
 Identities = 468/470 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctttaagggactgcttttcctggtctatagaggagagtaaaaacagctgtatagtgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttaagggactgcttttcctggtctatagaggagagtaaaaacagctgtatagtgtg 260

                                                                       
Query: 61  ttttgtcttgagagggaaaaatcagataagcatcaagaaaccttattcaaataataactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttgtcttgagagggaaaaatcagataagcatcaagaaaccttattcaaataataactc 320

                                                                       
Query: 121 cagcttcagctaacctgccaacaatgccaaatttcctttttgcatgctcagttcctcttc 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 cagcttcagctaacctgccaacaatgccaaatttcctctttgcatgctcagttcctcttc 380

                                                                       
Query: 181 tgaatgaagacctagctatgtaggaatgagccatattttaggtaggttaactaaaatttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaatgaagacctagctatgtaggaatgagccatattttaggtaggttaactaaaatttg 440

                                                                       
Query: 241 agaacattctgttctcttgtgatgaggtagtgttcaatatacagaagatcaggtggttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 agaacattctgttctcttgtgatgaggtagtgttcaatatacagaagattaggtggttca 500

                                                                       
Query: 301 catgtcgttcttgttcaggagagcatctttgtggtgaatagctctccaatgttgagaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgtcgttcttgttcaggagagcatctttgtggtgaatagctctccaatgttgagaatg 560

                                                                       
Query: 361 ggactaactgtatttctaattttgtgacaaaatacctgagataatcaagttacaaaaaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggactaactgtatttctaattttgtgacaaaatacctgagataatcaagttacaaaaaga 620

                                                             
Query: 421 aaagggtttattttgactcatagttctggagattgtgatatttgtgagaa 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagggtttattttgactcatagttctggagattgtgatatttgtgagaa 670


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space:   395600
Effective search space used:   395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)