Query= MSMg01no378_n16.b1 MSMg01no378_n16.b1 CHROMAT_FILE:
MSMg01no378_n16.b1 PHD_FILE: MSMg01no378_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:26 2005
(511 letters)
>mm_chr4_126008439_126009349
Length = 911
Score = 973 bits (503), Expect = 0.0
Identities = 506/507 (99%)
Strand = Plus / Plus
Query: 5 gaattcccaaatctttcaggaaccttgactcaagtcaaacggtcattgtagcttcaactt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccaaatctttcaggaaccttgactcaagtcaaacggtcattgtagcttcaactt 264
Query: 65 agaaaaaaagagttggaattctccagtatgaacgtgagctgaggtttattaaaagtaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaaaaaaagagttggaattctccagtatgaacgtgagctgaggtttattaaaagtaaac 324
Query: 125 atgagaattgagaggagagctcagagagaaagacacgccccggagcattcatgtggactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgagaattgagaggagagctcagagagaaagacacgccccggagcattcatgtggactt 384
Query: 185 ctttcacggggaactctgctatctttacaggtcatagataggggctgggtgggtttgaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttcacggggaactctgctatctttacaggtcatagataggggctgggtgggtttgaag 444
Query: 245 ctattgtctgggggcacccaataggattagaattgataatgttaaaaaagtctagctcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctattgtctgggggcacccaataggattagaattgataatgttaaaaaagtctagctcac 504
Query: 305 aggatgcagaatggtgaattatctttattgtaaatgaagtcatgctcatgaaaagttatt 364
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 aggatgcagaatggtgaattatctttattataaatgaagtcatgctcatgaaaagttatt 564
Query: 365 tattattacaattgctgttgttgtcttgtgtttgttggtccatttatgccatggtgccca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tattattacaattgctgttgttgtcttgtgtttgttggtccatttatgccatggtgccca 624
Query: 425 cagagaggtctgaggacaaccatcaggagtcagttctctagttccatcctgagttctgat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagagaggtctgaggacaaccatcaggagtcagttctctagttccatcctgagttctgat 684
Query: 485 gactgagcctaggtcaggctgtcaggc 511
|||||||||||||||||||||||||||
Sbjct: 685 gactgagcctaggtcaggctgtcaggc 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_n16.g1 MSMg01no378_n16.g1 CHROMAT_FILE:
MSMg01no378_n16.g1 PHD_FILE: MSMg01no378_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:26 2005
(442 letters)
>mm_chr4_126186500_126187341
Length = 842
Score = 787 bits (407), Expect = 0.0
Identities = 434/443 (97%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 1 accccatagaccaggctggcatcaaactcacagagatccacgtgcctctgcctcccaagt 60
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 631 accccatagaccagactggcatcaaactcacagagatccacatgcctctgcctcccaagt 572
Query: 61 gctgggattaaaagcatgtgcctttagtataagagcataaacacttaatgttgaatgaga 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 571 gctgggattaaaagcatgtgcctttagtataagagtataaacacttaatgttgaatgaga 512
Query: 121 gatgatttcaagtcctaggtatgacaga-ctaagctaggcgattgcacagtcccagctgt 179
|||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||
Sbjct: 511 gatgatttcaagtcctaggtatgaca-atctaagctaggtgattgcacagtcccagccgt 453
Query: 180 gcattgttagtggtctaagccacagggactcaggtgtgtgtacaggcagatagctcagtg 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gcactgttagtggtctaagccacagggactcaggtgtgtgtacaggcagatagctcagtg 393
Query: 240 gtagagtactttgcctcgcaagctccctgaaacattggaaaatggtgggattggggcatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtagagtactttgcctcgcaagctccctgaaacattggaaaatggtgggattggggcatg 333
Query: 300 gtgatgtgctctgccattccttcccctcttctcccccaacccttctccccttttctgttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtgatgtgctctgccattccttcccctcttctcccccaacccttctccccttttctgttg 273
Query: 360 agacaagattttatgtaggctggccttgaactcatgtgatagagaatggccttgaacatt 419
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agacaaaattttatgtaggctggccttgaactcatgtgatagagaatggccttgaacatt 213
Query: 420 ggatcctcctatttctacctccc 442
|||||||||||||||||||||||
Sbjct: 212 ggatcctcctatttctacctccc 190
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
