Query= MSMg01no381_c01.b1 MSMg01no381_c01.b1 CHROMAT_FILE:
MSMg01no381_c01.b1 PHD_FILE: MSMg01no381_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:26 2005
(364 letters)
>mm_chr4_51951697_51952461
Length = 765
Score = 594 bits (307), Expect = e-174
Identities = 338/353 (95%), Gaps = 10/353 (2%)
Strand = Plus / Plus
Query: 5 gaattcagtcact-tacttacttttcaggatctattttttgtattagttgcctctagtca 63
|||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcagtcacaataattacttttcaggatctattttttgtattagctgcctctagtca 264
Query: 64 ctgttactgatataccactataccagagatagtcacctaaggaagaaaaaaaattctatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgttactgatataccactataccagagatagtcacctaaggaagaaaaaaaattctatc 324
Query: 124 tttatttgcattttctgcagttgaagtccagttgggcttggttacttttcacttgaggta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttatttgcattttctgcagttgaagtccagttgggcttggttacttttcacttgaggta 384
Query: 184 atagagattatcatcacaggaaggataaggtggggcaaagtggctcacctagaagattct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagagattatcatcacaggaaggataaggtggggcaaagtggctcacctagaagattct 444
Query: 244 gggaaggtagatgcaagctgggaggaagggatggagagacagagacagagacagagagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 gggaaggtagatgcaagctgggaggaagggatggagagacagagacagaga--gagagag 502
Query: 304 agagagagagagagagagagagaggaggaaaaggaggaggaggaggaggagga 356
|||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 503 agagggagagagag-------gaggaggaaaaggaggaggaggagggggagga 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 765
Length adjustment: 9
Effective length of query: 355
Effective length of database: 756
Effective search space: 268380
Effective search space used: 268380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_c01.g1 MSMg01no381_c01.g1 CHROMAT_FILE:
MSMg01no381_c01.g1 PHD_FILE: MSMg01no381_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:26 2005
(658 letters)
>mm_chr4_52103017_52104073
Length = 1057
Score = 1226 bits (634), Expect = 0.0
Identities = 652/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Minus
Query: 1 agagttttgctctgctgtgtcacagtatgaagttctgagcatatgcacttgtgtaattta 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 857 agagttttgctctgctgtgtcacagtatgaagtactgagcatatgcacttgtgtaattta 798
Query: 61 caaggtattgcaattaaggtgtccagtcatctcttctctggatcatctaaacttgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 caaggtattgcaattaaggtgtccagtcatctcttctctggatcatctaaacttgttctt 738
Query: 121 ttatttcttattgtgtatttgctaaaaacctaagtatagaatctctgaatctctccaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttatttcttattgtgtatttgctaaaaacctaagtatagaatctctgaatctctccaata 678
Query: 181 gatctagtgatatggtctgtcttgttatattcagtattgtttttgtcccttaatgatact 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 677 gatctagtgatatggtctgtcttgttatattcagtattg-ttttgtcccttaatgatact 619
Query: 241 tttagaccacactgagcttttatattccttaataggatatgggccattcttatgtaacct 300
|||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||
Sbjct: 618 tttagaccacactgagctttcatattctttagtaggatatgggccattcttatgtaacct 559
Query: 301 cagaatctgggcacatatctcaaattttcccctgtctcaaagggaaatttaagcagaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cagaatctgggcacatatctcaaattttcccctgtctcaaagggaaatttaagcagaaag 499
Query: 361 tcatatctacattgtctggactacagataacattttccagatttctgagatgataatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcatatctacattgtctggactacagataacattttccagatttctgagatgataatttt 439
Query: 421 attaataatttagaagttttagtgtatagtcagcatgacactcaaagtatcaattatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 attaataatttagaagttttagtgtatagtcagcatgacactcaaagtatcaattatacc 379
Query: 481 caagtaacatgaaatttcattggccatccctattacatgtgcatgtacatatatatctat 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 378 caagtaacatgaaatttcattggccatccctattacatgtacatgtacatatatatctat 319
Query: 541 ttttgacacatctcacagagctgtgtagtcacaaatttatgtgattaaaatatttaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttttgacacatctcacagagctgtgtagtcacaaatttatgtgattaaaatatttaagca 259
Query: 601 attaaatattttagacaccagtaatgataaacaatatgctatgagtaggttgggaagt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attaaatattttagacaccagtaatgataaacaatatgctatgagtaggttgggaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
