XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTACCT
GATGAATACCGAATGGCTGAGAAGCACCTCAAAAAATGTTCAGCATCCTT
AATCATCAGGGAAATGCAAATCACAACAACCCTGAGATTCCATCTCACAC
CAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCTA
GGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTACAAGCT
TCTACAATCACTCTGGAAATCAGTCTGGGGGTTCCTCAGAAAATTGGACA
TAGTACTACCGGAGGATCCTGCAATACCCCTCCTGGGCATATATCCAGAA
GATGTTCCAACTGGTAAGAAGGACATATGCTCCACTATGTTCATAGCAGC
CTCATTTATAATAGCCAGAAGCTGGAAACAACCCAGATGCCCCTCAACAG
AGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTAC
TCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGA
CCTGGAGGGCATTATCCTGAGTGAGGTAACACAATCACAAAATAACTCAA
ATGATATGTACTCATTGATAATTGGATATTAGCCCAGAAACTTAGTATAC
CCGGGATATAAGATACAATTTGCAAAACAAATGAAACTCTAGAAGAATGA
CGACCAAAGTGTGGGTACTTTTGCCTCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTAGAAATCCCTCCAATATGGAT
TTTTGCAAAAGGTCACAACTTGTGGATAAAATGCAATAGACACTTGGCTA
AAGCAACTTAAATCACTTAAAACTTTTAAGGAAAAAAAAACAGCTGTGGA
CAATGTGACATAGTGGTCATATTGACACCAGTGTCGGGACTGTATATGCA
CATCAGAGATGGTGCTTCCTGAGCAAAATGGAAACCGAATATTGGTCTCA
AAAATGATCTTCAAACTTTTTTATCAACTGAGATAAACTTGTCAGAAAGC
AAGCTCAAGAGGGCTTGGGAAATACTGCTCCCTACATCATGAAAGAATGG
AGGCATCTTCTTGGAAGGATCTTGCTCCTACCTATTTTTATTCTCTAGCA
TTATTGTCCAAGCACACAGCAGGATAATGTTTCATTCCATACAGGAAGTT
GCAAGGGAAACATGTATTAGGACCAGAAACATTCATGCAGGTTGATGCTG
ATTGCACATAGCCATGTGTGATGGAAGTGCTGTTGTAATTAGCAGTCTGT
TGGCACTACCATTATAAACCATATTTCTAAGCAGTCTATAACTCGATGGT
TTTAATGAGAATTTGCTCTTCAGAATAAAACTTGGCATANAGGGATTAAA
AACAGAAATTCTCAAATTCACCAGAGCACATGTAAGCT

Query= MSMg01no382_a04.g1 MSMg01no382_a04.g1 CHROMAT_FILE:
MSMg01no382_a04.g1 PHD_FILE: MSMg01no382_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:37 2005
         (609 letters)



>mm_chr4_6910689_6911699
          Length = 1011

 Score = 1075 bits (556), Expect = 0.0
 Identities = 597/614 (97%), Gaps = 8/614 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctagaaatccctccaatatggatttttgcaaaaggtcacaacttgtggataaaatgcaa 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaggaatccctccaatatggatttttgcaaaaggtcacaacttgtggataaaatgcaa 260

                                                                       
Query: 61  tagacacttggctaaagcaacttaaatcacttaaaacttttaaggaaaaaaaaa--cagc 118
           ||||  ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||
Sbjct: 261 tagatgcttggctaaagcaacttaaatcatttaaaacttttaaggaaaaaaaaaaacagc 320

                                                                       
Query: 119 tgtggacaatgtgacatagtggtcatattgacaccagtgtcgggactgtatatgcacatc 178
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tgtggacaatgtgacatagtggtcatattgacaccagtgtcgggactgtaaatgcacatc 380

                                                                       
Query: 179 aga---gatggtgcttcctgagcaaaatggaaaccgaatattggtctcaaaaatgatctt 235
           |||   ||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaagcgatg---cttcctgagcaaaatggaaaccgaatattggtctcaaaaatgatctt 437

                                                                       
Query: 236 caaacttttttatcaactgagataaacttgtcagaaagcaagctcaagagggcttgggaa 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caaacttttttatcaactgagataaacttgtcagaaagcaagctcaagagggcttgggaa 497

                                                                       
Query: 296 atactgctccctacatcatgaaagaatggaggcatcttcttggaaggatcttgctcctac 355
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 498 atactgctccctacatcatgaaagaatggaggcatctttttggaaggatcttgctcctac 557

                                                                       
Query: 356 ctatttttattctctagcattattgtccaagcacacagcaggataatgtttcattccata 415
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 558 ctatttttattctctagcattattgcccaagcacacagcaggataatgtttcattccata 617

                                                                       
Query: 416 caggaagttgcaagggaaacatgtattaggaccagaaacattcatgcaggttgatgctga 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caggaagttgcaagggaaacatgtattaggaccagaaacattcatgcaggttgatgctga 677

                                                                       
Query: 476 ttgcacatagccatgtgtgatggaagtgctgttgtaattagcagtctgttggcactacca 535
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctgcacatagccatgtgtgatggaagtgctgttgtaattagcagtctgttggcactacca 737

                                                                       
Query: 536 ttataaaccatatttctaagcagtctataactcgatggttttaatgagaatttgctcttc 595
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 738 ttataaaccatatttctaagcagtctataactcgatgtttttaatgagaatttgctcttc 797

                         
Query: 596 agaataaaacttgg 609
           ||||||||||||||
Sbjct: 798 agaataaaacttgg 811


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1011
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1001
Effective search space:   599599
Effective search space used:   599599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)