XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTGTT
TATCTCTGAACCCCAATTTTAATTGGGTTATTTGAATTTCTGGAGTCTAG
CTTCTTGAGCTCTTTGTATATATTGGATATTAGTCCCTTATCAGATTTAG
GATTGGTAAAGAAGTTCCAACTGGTAATAAGAACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGACAGAAGCTGGAAAGAACCCAGTTGT
CCCTCGACAGAAGAATGGATGCAGAAAATGTGGTACATTTACACAATGGA
GTACTACTCAGCTATTAAAAACAATGGATTTATGAAATTCTTGGAAAAAG
GGATTTATCTGGAGGATAACATACTTAGTGAGGTAACCCAATCACAAAAG
AAGTCATTAGATATGCACTCACTGATAAGTGGATATTAGCTCAGAAATAT
AGAACACCCAAGATACAATTTGCAAAACACAAGGAAATCAAGAAGTGGGA
AGACCAATAGATGTATACTTCATTTCCTCCTTAAAAAAGGGGACAAAAAA
ACCATGAAAGGACTTATATAACACCAAGTTTGGAGTTTAAAAGAAAGGGG
TAATTATCCCGAAAATACCCCCCCCTGGGATTCTTCCCCCATCCGGTTTC
TAAAACAGAAACTATTTCTTTTGTCTTAAAATTTTTGTTTAAGGGACTCT
GTGTTACTTTTCTCCTAGGAGGAATGTCTGGGTCGGTGAATTACACAATG
GATGGTTCCCCTTCTCTTTACTATAAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXATATTTTATTTACAGCTTTACTTTCATTGTTGACAT
GATGTTTCTTATTGTCTGATGATAGACCAAGACCATCCTGTCTATGCTAT
TAGTGATTTAATGGTACCTCCAAGACAAGTTGTTACTTATTTTTGTCCAG
AAAGGATAGTGAAATGTATTGCTGTGGGCCACAACAACAGCAGGATCCCT
CAGGTAATATTTCAGGGTGCCTCAGGTAATGCATAGAACTCATGGACTTG
GAAAAGCATGATTGCACAAATGATTGCCAGAGTGAGTATTTATGTATGAA
AATGAAAAGGATAGTATTACAGCATCCAAATAGGAAACGCTTCATGTGTC
AGGTGACCTATTTTCCACAGATGGTTTTTTTAATTTGTAATTTGGGGAGA
ATTCATGATGCTTTCAGAAAATTCTTGATAGATGCTATTAAATCTATTAA
ATCCTAAATGTATTTCCAGAAGTCCTCCTATGTCCAAAGCACCCAAAACA
AGGTGAAGGAAAAGGTTGATTTTACATGGCTTAATCTACCTGAGCCTGGG
AGGCTATATGGAGCATATGAATTTACTGTTGGACTATTGATTCCACCTTT
TGGTTTTATGGCAGGGCCTTCCTTTTACTATATATTGGTCCCCCTGCCAA
GGGAGATTGAGTTTTATTCCCGGTTCTCCTTTTGTTCCCCCTTGGAGCAT
AAAATCCCCCAAAATCCTTA

Query= MSMg01no382_b20.g1 MSMg01no382_b20.g1 CHROMAT_FILE:
MSMg01no382_b20.g1 PHD_FILE: MSMg01no382_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:45 2005
         (446 letters)



>mm_chr4_20558019_20558863
          Length = 845

 Score =  793 bits (410), Expect = 0.0
 Identities = 437/448 (97%), Gaps = 5/448 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atattttatttacagctttactttcattgttgacatgatgtttcttattgtctgatgata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 atattttatttacagctttactttcattgttgacatgatgtttcttattgtctgatgata 586

                                                                       
Query: 61  gaccaagaccatcctgtctatgctattagtgatttaatggtacctccaagacaagttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gaccaagaccatcctgtctatgctattagtgatttaatggtacctccaagacaagttgtt 526

                                                                       
Query: 121 acttatttttgtccagaaaggatagtgaaatgtattgctgtgggccacaacaacagcagg 180
           |||| ||||||||||||||||| |||||||||||||||||||||||   |||||||||||
Sbjct: 525 acttttttttgtccagaaaggacagtgaaatgtattgctgtgggcc---acaacagcagg 469

                                                                       
Query: 181 atccctcaggtaatatttcagggtgcctcaggtaatgcatagaactcatggacttggaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atccctcaggtaatatttcagggtgcctcaggtaatgcatagaactcatggacttggaaa 409

                                                                       
Query: 241 agcatgattgcacaaatgattgccagagtgagtatttatgtatgaaaatgaaaaggatag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agcatgattgcacaaatgattgccagagtgagtatttatgtatgaaaatgaaaaggatag 349

                                                                       
Query: 301 tattacagcatccaaataggaaacgcttcatgtgtcaggtgacctattttccacagatgg 360
           | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| 
Sbjct: 348 tgttacagcatccaaataggaaacacttcatgtgtcaggtgacctattttccacagatga 289

                                                                       
Query: 361 ttttttt--aatttgtaatttggggagaattcatgatgctttcagaaaattcttgataga 418
           |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 288 tttttttttaatttgtaatttggggagaattcatgatgctttcagaaaattcttgacaga 229

                                       
Query: 419 tgctattaaatctattaaatcctaaatg 446
           ||||||||||||||||||||||||||||
Sbjct: 228 tgctattaaatctattaaatcctaaatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 845
Length adjustment: 10
Effective length of query: 436
Effective length of database: 835
Effective search space:   364060
Effective search space used:   364060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)