XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTTT
ATGCTCTGTACTCCATTTTTTAATAGGGTTATTTGGTTCTTTGGAGTCTA
ACTTCTTGAGTTCTTTGTATATATTGGATATTAGCCCTCTATTGGATGTA
GGATAGGTAAAGATCTTTTCCCAATCTGTTGGTTGCTGTTTTGTCCTATT
GACAGTGTTCTTTGTCTTATAGAAGCTTTGCAATTTTATGAGATTTCATT
TGTCAATTCTTTATCTTAGAGCATAAGCTATTGGTGTTCTGTTCAGGAAA
ATTTCCCCTGTGCCTGTATCTTTGAGGCTCTTCCCCACCTTTTCTTTTAT
AAGTTTCAGTGTCTCTGGTTTTATGAGGAGTTACTTGATCCACTTAGACT
TGAGCTTTGTACAAGGAGATAGGAATGGATCAATTTGCATTCTTCTACAT
GATAACTGCCGGTTGAACCAGCACCATTTGTTGAAAATGCTGTCTTCTTT
CCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAAGTGT
GTGGGCTCATTTCTGGGTCTTCAATTCTATTTCATTGATCTACTTGCCTG
TCACTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAATACAG
CTTGTATTTAGGGATGGTGATTCCACCAGAAGTTCTTTTATTGTTGAGAA
ATAGTTTTGCTATCCTAAGTTTTTTGTTATCCCGA

CGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGGAAAGAGGGAAAAAGGGGAGA
AATGGTGTAATTATATTATACTCAAAGAATATTTTTTTAAAAAACACAGA
ATAAATTATTTTATCATGGTTAGATCATGATTAGAAACAACTGCTAAAGT
TTACTTAATAGAAAAACCAAAGATACTAAAAAAAACATCATTTGCAGAAA
ATACAAGTTGACTCAACAAAAAGAAAAAAAAAGGATTTCACTATTTGATA
TGTGCAGTGATGTGAGTAGATCAGTATCTACCCCAGTAGCAGTAAAGAGC
TCTAAGGGGACAGAGGAGCAGTTGAGGTGGAGAGGCAGAGTTTGTAAATG
CAGTTAACTTGTATTATGTGCTTGTGACATTCCACACTTTATTCTGAAAT
ACATTTCATTTGTTCTAAAATCACCAGAAAGTGAGATGAAATAATTCTCA
CAATCAAACAGCCAAAACCATTATTTAAAATGAGTATGTATAAATATACT
AATAAAGATATCACAATTAATTTGATACTATCTATACAATTTGAAAATAT
AAGTAAAGGAAGTCAAGGAAGTTAGTCCATATTTAAAGCTTTACAAAATA
TTTACAGTAACACCCAAAAACAAATACCAGCTATTTTATCCCCAAATAAA
CCAGCCATTGTACATGGCTTATACAATTTAAAAAGAAGCTCCTTATTTTT
ATATGACG

Query= MSMg01no382_m08.g1 MSMg01no382_m08.g1 CHROMAT_FILE:
MSMg01no382_m08.g1 PHD_FILE: MSMg01no382_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:37 2005
         (553 letters)



>mm_chr4_16275474_16276426
          Length = 953

 Score =  971 bits (502), Expect = 0.0
 Identities = 535/546 (97%), Gaps = 3/546 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   gaggg-aaaaaggggagaaatggtgtaattatattatactcaaagaatatttttttaaaa 66
           ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 800 gagggaaaaaaggggggaaatggtataattatattatactcaaagaatattttttt-aaa 742

                                                                       
Query: 67  aacacagaataaattattttatcatggttagatcatgattagaaacaactgctaaagttt 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacacagaataaattattttatcatggttagatcatgattagaaacaactgctaaagttt 682

                                                                       
Query: 127 acttaatagaaaaaccaaagatactaaaaaaaacatcatttgcagaaaatacaagttgac 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttaatagaaaaaccaaagatactaaaaaaaacatcatttgcagaaaatacaagttgac 622

                                                                       
Query: 187 tc-aacaaaaagaaaaaaaaaggatttcactatttgatatgtgcagtgatgtgagtagat 245
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaaaaaaaaagaaaaaaaaaggatttcactatttgatatgtgcagtgatgtgagtagat 562

                                                                       
Query: 246 cagtatctaccccagtagcagtaaagagctctaaggggacagaggagcagttgaggtgga 305
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtatctaccccaatagcagtaaagagctctaaggggacagaggagcagttgaggtgga 502

                                                                       
Query: 306 gaggcagagtttgtaaatgcagttaacttgtattatgtgcttgtgacattccacacttta 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggcagagtttgtaaatgcagttaacttgtattatgtgcttgtgacattccacacttta 442

                                                                       
Query: 366 ttctgaaatacatttcatttgttctaaaatcaccagaaagtgagatgaaataattctcac 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgaaatacatttcatttgttctaaaatcaccagaaagtgagatgaaataattctcac 382

                                                                       
Query: 426 aatcaaacagccaaaaccattatttaaaatgagtatgtataaatatactaataaagatat 485
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 381 aatcaaacagccaaaaccattatttaaaatgagtatgtagaaatatactaataaatatat 322

                                                                       
Query: 486 cacaattaatttgatactatctatacaatttgaaaatataagtaaaggaagtcaaggaag 545
           ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaattaacttgatactatgtatacaatttgaaaatataagtaaaggaagtcaaggaag 262

                 
Query: 546 ttagtc 551
           ||||||
Sbjct: 261 ttagtc 256


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)