TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTAAATTAGTT
TTGTATTAAAGATCTTGCTTAGTTTCCAAAAATCTGGAACCCATGGAACG
AATAGGACAGTAAGAGTAGCGGATGAGATAGAAATGATCAAAAATACTTC
TGAGGTCTGACCTTTAATATATATATATATATATATATATATATATAAAG
GAAAAATACACAATGCATCATGAAGATGGAGATTTCAATAATGGCCCAGT
ACAAGAAACGATGGTAATTATGGAATACTTTACATCAGAACTGCTTGAAT
TCAGGAAGAGGTTTTGTAGCCTCTAATGCTGAGACAGACAGGCTCAGTCT
GAGTGCTGAAGAACTAGAATTACCTTTCCTGTCTTGAGTCAAAGACTATG
TAACCTGAGGCAATGAAAAGAAAATCAATTTTCTGACCCATTGTTTATCA
TGAGTCATAAGAGACATGTCACTTTAGCAGGGTTTGGGGATGATATTTTG
ACGAACCTAGGTGCAGCTGAAGGAGAGGCATAAGCCACAGTACCGACTCA
AAGTATGTCAGATCCAGACCCAACTTAGCCTCAGATAAATTAGGCAAGAA
TGTGCCTCTTATTTTTAATGCCTGGCCAGACTGCGGAATATAAACCATCA
TTACCAAGCTTTACAGTGAAGGAGAGTTTTGTGGCAGTGTCCTACAATGA
AAAAAGAAAAAGCTCCTTGAGAAGGGTGGTGAACTAAAGGTGGCTTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXAGCTGAACTATAAATGCAAAGATTAAAGTTATGTAGG
TTTGTGGAAGAACATAGGCTTAGTATGTATAAGGCCATACTGTCAAACAC
ACACACACACACACTTTAACTGTACAAATTGTTTTGAAATGTTTTTAATG
TTTACAAATTACTCATATAGGGGCCTAGAGAGAGAGCTTACTGGTTAAAA
GCACTGCTGTTCCAGAGGACCTGGATTCAATCCACGGCAGCTCACACAAA
TCACTCATATAAAAAACATCATCTACCACTCAATCACTTGTGCTTGATCT
AAAAGGTAAATAATAAAAGGAACCTTTAAATGTGTGTTAAAGGTAATAGT
AGCTTTATAATAGGACTAAATGAAACACAATAGTTGGCTGCAGCTAGAAC
CGGAATAAACAGCCAGATCTGACCCAAAAGCCAAGCATGGGGCTGTGTAG
AAAGGTGATTTTGACAGCAATAAGTTATGGCTATAAATGCTTAATGACTT
TCTTACTTGTTAATATTTTCAGTCAAACTTGGTTATAAGTTGGAATGCAG
TGTGCTGGCTATAACTTGGCTCTGGAAATCAATCATACACTTTACAGACT
GAATATACTTTTTACTTCTAAACTTTGGCTTTCACCCCCCTATTTTTCAA
GAAATCTTTTCAAAAAAACTCCGAAACTTTATTATTTCGCCCCAAAAAAA

Query= MSMg01no384_d13.g1 MSMg01no384_d13.g1 CHROMAT_FILE:
MSMg01no384_d13.g1 PHD_FILE: MSMg01no384_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:28 2005
         (526 letters)



>mm_chr4_21228554_21229477
          Length = 924

 Score =  893 bits (462), Expect = 0.0
 Identities = 508/524 (96%), Gaps = 2/524 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgaactataaatgcaaagattaaagttatgtaggtttgtggaagaacataggcttagta 62
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 203 ctgaattataaatgcaaagattaaagctatgtaggtttgtggaagaacataggcttagtg 262

                                                                       
Query: 63  tgtataaggccatactgtcaaacacacacacacacacactttaactgtacaaattgtttt 122
           |||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||||
Sbjct: 263 tgtataaggccatagtgtcaa--acacacacatacacactttaactgtacaaattgtttt 320

                                                                       
Query: 123 gaaatgtttttaatgtttacaaattactcatataggggcctagagagagagcttactggt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatgtttttaatgtttacaaattactcatataggggcctagagagagagcttactggt 380

                                                                       
Query: 183 taaaagcactgctgttccagaggacctggattcaatccacggcagctcacacaaatcact 242
           ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 taaaagcactgctcttccagaggacctggattcaatccatggcagctcacacaaatcact 440

                                                                       
Query: 243 catataaaaaacatcatctaccactcaatcacttgtgcttgatctaaaaggtaaataata 302
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 catataaaaaacatcatctgccactcaatcacttgtgtttgatctaaaaggtaaataata 500

                                                                       
Query: 303 aaaggaacctttaaatgtgtgttaaaggtaatagtagctttataataggactaaatgaaa 362
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 aaaggaacctttaaatgtgtgttaaaggtaatggtagctttataataggactaaatgaaa 560

                                                                       
Query: 363 cacaatagttggctgcagctagaaccggaataaacagccagatctgacccaaaagccaag 422
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacaatagttgcctgcagctagaaccggaataaacagccagatctgacccaaaagccaag 620

                                                                       
Query: 423 catggggctgtgtagaaaggtgattttgacagcaataagttatggctataaatgcttaat 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catggggctgtgtagaaaggtgattttgacagcaataagttatggctataaatgcttaat 680

                                                       
Query: 483 gactttcttacttgttaatattttcagtcaaacttggttataag 526
           ||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 681 gactttcctatttgttaatattttcagtcaaactttgttataag 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 924
Length adjustment: 10
Effective length of query: 516
Effective length of database: 914
Effective search space:   471624
Effective search space used:   471624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)