GGCGCTAAACGACTCCTATATGCAGAGGATCCGCGGAATTCGGGGGAGGA
AGCCATTGGGAGAATAGAAAAAGTCCCAGAGGAGGATCTACATCGCTCTC
GCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
AGACAACAGAAGTTATGACAATGAGGACGGACAGAGGCTCTGGAGCGGCT
GCTGAGCCAAGTGCACAACAGGAAGAAAGTAGAGGGCTCTGGAGAATGGG
GACCAAAATCAGGATGTGGCGCACGCCTTTAATCTCAACACTTGGAAGAC
AGAGGCAGATGCTTCTCTGTGAGTTCAAGGCCAGTTTGGTCTACAGAGTG
AATTCCAGCCTACACAGAGAAACCCTGTCTCAAAACAAAAACAAAAAGGA
GCGGGATGTCAGGGTAGGAAGGAGGCCAAGGCAGGAGTCCGGCAGACGGT
GGATTTGCTCCGGAGGGCCGGGGGTGGGGGTGACGACCTATTTACGGGGT
GAAGGGAAAGAAGGAGGACACCCCAGAACTGGGTCACCTCAAGAAAAAGG
AAAGTGGTAGGAACTATACCTGACAGAAGCCTCTTGGGTGGGGGGAAAAA
AAAGGGCCAAGTGACTCCACAAGGGGCTTGGGAGGGCCTGGGGCGAAACC
CAAAAGCCCGCGGCGTTGTCAAAAAATATTGCCTTATAGATCCCTCTCCT
AAACTCCCCAAGGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCTGTCTTCGGGGCCCTGCCCTACCTAGGCTATGCTACAGG
ATCCACCACAGTCCAAAACCAGGAATTAGAGAGAGAGAGAGAATGAGAAA
AACAAGAACAGGTGCCAGCTACATTGAGAGCCGAAGATCTGGAATGAAAC
AATCACTTTCATCAGGGCCTAAGAATCAAACTCATCCCAGCCCTTCGTAA
TACATCTACATAATCCAAGGAGCCAGTTTGTTGTAGAGGCAGAGGATCAA
AGATGATAATACCTACAAGGGCATCCCTCCAAAAAGGTCTCAAGGGCAAA
CTGCTGAGTAGAAATTCTTTCCCTCAAAGGATCTTCTTGTACCAAAGACT
TTCCCCCAGAGCTGGAGATTACAACTTCTGAAAGGGTCTGCTAGGCTAAA
CTCAGAGCTGGGGCAGCTCCAAGGGATCTGGAGCTGGGCTGTGGGTCCCA
GTGACAGACTCAAGGGCAGCAGCTGAGGGATACTCCCAGGCCCTCAGAAG
GACCTCCTAGGGCAACTTTGGTGAGAGAGCTCCACCCTAAAAAGGATGGT
CTAGCCTGAGACCAGGCAAGGGTGCCCAGCAGACACTTGAGGACAAACTT
TCGAAAGACTCTCGGAATGGGGTGTTCTCTAAGGACCTCTTTTGAGGCCA
TGGGTGGCGGGCATGGGCAGGAACATAAAAGATCCCCCCGGGGAGGTCCC
CCAAAATG

Query= MSMg01no384_m22.g1 MSMg01no384_m22.g1 CHROMAT_FILE:
MSMg01no384_m22.g1 PHD_FILE: MSMg01no384_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:11 2005
         (523 letters)



>mm_chr4_123555838_123556762
          Length = 925

 Score =  975 bits (504), Expect = 0.0
 Identities = 517/522 (99%), Gaps = 2/522 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgtcttcggggccctgccctacctaggctatgctacaggatccaccacagtccaaaac 60
           ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 722 tctgtcttcggggtcctgccctacccaggctatgctacaggatccaccacagtccaaaac 663

                                                                       
Query: 61  caggaatt--agagagagagagagaatgagaaaaacaagaacaggtgccagctacattga 118
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caggaattagagagagagagagagaatgagaaaaacaagaacaggtgccagctacattga 603

                                                                       
Query: 119 gagccgaagatctggaatgaaacaatcactttcatcagggcctaagaatcaaactcatcc 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagccgaagatctggaatgaaacaatcactttcatcagggcctaagaatcaaactcatcc 543

                                                                       
Query: 179 cagcccttcgtaatacatctacataatccaaggagccagtttgttgtagaggcagaggat 238
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 542 cagcccttcgtaatacatctacataatccaaggagccagtgtgttgtagaggcagaggat 483

                                                                       
Query: 239 caaagatgataatacctacaagggcatccctccaaaaaggtctcaagggcaaactgctga 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caaagatgataatacctacaagggcatccctccaaaaaggtctcaagggcaaactgctga 423

                                                                       
Query: 299 gtagaaattctttccctcaaaggatcttcttgtaccaaagactttcccccagagctggag 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtagaaattctttccctcaaaggatcttcttgtaccaaagactttcccccagagctggag 363

                                                                       
Query: 359 attacaacttctgaaagggtctgctaggctaaactcagagctggggcagctccaagggat 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attacaacttctgaaagggtctgctaggctaaactcagagctggggcagctccaagggat 303

                                                                       
Query: 419 ctggagctgggctgtgggtcccagtgacagactcaagggcagcagctgagggatactccc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctggagctgggctgtgggtcccagtgacagactcaagggcagcagctgagggatactccc 243

                                                     
Query: 479 aggccctcagaaggacctcctagggcaactttggtgagagag 520
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggccctcagaaggacctcctagggcaactttggtgagagag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 925
Length adjustment: 10
Effective length of query: 513
Effective length of database: 915
Effective search space:   469395
Effective search space used:   469395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)