Query= MSMg01no385_f04.b1 MSMg01no385_f04.b1 CHROMAT_FILE:
MSMg01no385_f04.b1 PHD_FILE: MSMg01no385_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:52 2005
(428 letters)
>mm_chr4_141496953_141497780
Length = 828
Score = 754 bits (390), Expect = 0.0
Identities = 411/418 (98%), Gaps = 1/418 (0%)
Strand = Plus / Plus
Query: 11 ggaattctctctgtataccagggtggccttggatttagggttccacccaccgttgcctct 70
||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 212 ggaattctctctgtagaccagggtggccttggatttagggatccacccgccgttgcctct 271
Query: 71 agggagttctggggattactggtgtgtgccaccactgcctggttgagagcttttgattct 130
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agggagttct-gggattactagtgtgtgccaccactgcctggttgagagcttttgattct 330
Query: 131 tttatttcatatgtatgggtgtttcacttctctgtatgtctgggctccatgtgtgtgcct 190
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 331 tttatttcatatgtatgggtgttttacttctctgtatgtctgggctccatgtgtgtgcct 390
Query: 191 ggtacccatggaggccagaagtagctgtcagatcgcctgttactagcgcagatggctgtg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggtacccatggaggccagaagtagctgtcagatcgcctgttactagcgcagatggctgtg 450
Query: 251 agcaaccatgtaggcgctcacaggggattgaactgggagaacaggctgtgctcttaacca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agcaaccatgtaggcgctcacaggggattgaactgggagaacaggctgtgctcttaacca 510
Query: 311 cccaggaaatgccgcattcaaagctctagagagactgaagatgtcacgttgctggctttg 370
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cccaggaaatgccgcattcgaagctctagagagactgaagatgtcacgttgctggctttg 570
Query: 371 aagaaagagaaagggctaggcctggtggcacaggcctggaatctaggatcttgggagg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aagaaagagaaagggctaggcctggtggcacaggcctggaatctaggatcttgggagg 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_f04.g1 MSMg01no385_f04.g1 CHROMAT_FILE:
MSMg01no385_f04.g1 PHD_FILE: MSMg01no385_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:52 2005
(465 letters)
>mm_chr4_141667748_141668612
Length = 865
Score = 704 bits (364), Expect = 0.0
Identities = 379/384 (98%), Gaps = 1/384 (0%)
Strand = Plus / Minus
Query: 1 actgatgaagcgggacctggagaaacacctgaacgtgtccaagaagttccaccaagttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actgatgaagcgggacctggagaaacacctgaacgtgtccaagaagttccaccaagttag 325
Query: 61 catcttgctgggaattgagctgctgtaccaagtgaacttcagcagggaggtgagaactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catcttgctgggaattgagctgctgtaccaagtgaacttcagcagggaggtgagaactaa 265
Query: 121 atgaggcggcagggcaggggcagacatcttccacagcctgtctccacatccaatttctgt 180
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 atggggcggcagggcaggggcagacatcttccacagcctgtatccacatccaatttctgt 205
Query: 181 ctaaccatctacccacccatccgctgatccatccatccattcacttattcaaccatcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctaaccatctacccacccatccgctgatccatccatccattcacttattcaaccatcaat 145
Query: 241 ctatccacccagtcatccacccatctacccacatatct-cccatcattccattcacccat 299
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 144 ctatccacccagtcatccacccatctacctacatatctacccatcattccattcacccat 85
Query: 300 ccactcctccatccacctgctgacccatctatccacttacccactgtccatccacccacc 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 84 ccactcctccatccacctgctgacccatctatccacctacccactgtccatccacccacc 25
Query: 360 catccatgtacctatccactctca 383
||||||||||||||||||||||||
Sbjct: 24 catccatgtacctatccactctca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
