TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCCCATGTAACACACTGGTTACTTGCCATTTCTAACTCATCAGGT
CCCCTAGATTATGTGTAGACCACAGTTAAACCAACTCTGCTTTCTAGAAA
ACACATATGGACATTTGATATTTTGAGCCTTTTTTAAATTAGAAAAGGGG
GGGCATTAATTTGATCCTGGCTTTCCTACTCCTCTGTGTATTATCTTTAC
TTATTTAAAGTAACCACATACAGAGAGCATATTCCCTGCTCTCCTGTTGC
CATTATTCTCTGAGGATGGCTACTAGGGAAAGAGGAGGCTCTGGGGTATC
CTGTGCGGAATGGAAAGGAAGTAGTGTTCCCAAATTGCCTTTTCATGCTA
CGCAGATTTATTCTGCAAAGCATAATTCATTTCATAACCACCTTGAGAAG
TGACAAGGATGCCAATCTCCTATTACAAGAAATCGGATGGGCTAAATTGT
AGAAGATACAGAAATTTATATCCAAGTGTGTAACATGGTTAAAAGCTTAG
GTCAGAACACATGTTGAAAATTTGTTGTCTTGGGAGTCTAGTCAAATACT
CAATTGTTCTAAAAAAAAAAAAGCCTAACTAACTAAAATACATATATACA
AACATACCAACATACATACCTACATACCTACATACATACCTACATACTTA
CATACTTACATACTTATATCTAACATTGAGGTCAAGGTTTTTTTCC

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATTTTTTAATG
GGGTTATTCAATTATCTGGAGCCTACCTTCTTGAGTTCTTTATATATATT
GGATATTAGTCCCCTATCCGATTTGGGATAGGTAAAGATCCTTTCCCAAT
CTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAG
CTTTGCAATTTTATGAGGTCCCATTTATCGATTCTCGATCTAACATATAA
CTTCTTAATTGGCTTTTTTGATTGAGTGAATGATTATGGCTGAATTGACT
CACGCATTCCACTCCCTGGCCAAATACCCCGAAGGGGGCTGGAAACTGGG
AAAAAGGGAACATTGTCCCCCCAAGGGTTTAGAGCCCCCTATTTTTTATA
AAGCCCAAAAGGCGGGAATTTAACCTGAAAGGCCCCCCCATAGAAGGGGA
GGGGTACCCCAAAATTGGGTATTCCTCTTTTCCCCAGGGGGGTTCTTTTT
TCCCGTTTATTTAAAAAACAGGGGTACTTTTACTTTCCGTTGTTGCGTCG
GGAATTTTATTCATATTTTCTCCCAACGGTCTGGGGGTTTTAGGGGGGAA
CAGTGGGGAACTTTGTTGGTTTTCTTGTTTTCTTTACAAAAAAAATTACC
TCCCTCCCCCGTTGGGCAAATAACTAGACTACTTTGTGGTTTTGGTCGGT
GAGATAACTTAATATCTGGTTTTTCCTTCATGGCGCCTGTTTATTATTCT
ATTTG

Query= MSMg01no386_m03.b1 MSMg01no386_m03.b1 CHROMAT_FILE:
MSMg01no386_m03.b1 PHD_FILE: MSMg01no386_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:38 2005
         (547 letters)



>mm_chr4_20292362_20293309
          Length = 948

 Score = 1019 bits (527), Expect = 0.0
 Identities = 543/549 (98%), Gaps = 3/549 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggttacttgccatttctaactcatcaggtcccctagattatgtgtagaccacagttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tggttacttgccatttctaactcatcaggtcccctagattatgtgtagaccacagttaaa 689

                                                                       
Query: 61  ccaactctgctttctagaaaacacatatggacatttgatattttgagccttttttaaatt 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 688 ccaactctgctttctagaaaacacatatggaca-ttgatattttgagccttttttaaatt 630

                                                                       
Query: 121 agaaaa--gggggggcattaatttgatcctggctttcctactcctctgtgtattatcttt 178
           ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agaaaagggggggggcattaatttgatcctggctttcctactcctctgtgtattatcttt 570

                                                                       
Query: 179 acttatttaaagtaaccacatacagagagcatattccctgctctcctgttgccattattc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 acttatttaaagtaaccacatacagagagcatattccctgctctcctgttgccattattc 510

                                                                       
Query: 239 tctgaggatggctactagggaaagaggaggctctggggtatcctgtgcggaatggaaagg 298
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tctgaggatggctacaagggaaagaggaggctctggggtatcctgtgcggaatggaaagg 450

                                                                       
Query: 299 aagtagtgttcccaaattgccttttcatgctacgcagatttattctgcaaagcataattc 358
           |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 449 aagtagtgttcccaaattgccttttcatgctaggcagatttattctgtaaagcataattc 390

                                                                       
Query: 359 atttcataaccaccttgagaagtgacaaggatgccaatctcctattacaagaaatcggat 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atttcataaccaccttgagaagtgacaaggatgccaatctcctattacaagaaatcggat 330

                                                                       
Query: 419 gggctaaattgtagaagatacagaaatttatatccaagtgtgtaacatggttaaaagctt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gggctaaattgtagaagatacagaaatttatatccaagtgtgtaacatggttaaaagctt 270

                                                                       
Query: 479 aggtcagaacacatgttgaaaatttgttgtcttgggagtctagtcaaatactcaattgtt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggtcagaacacatgttgaaaatttgttgtcttgggagtctagtcaaatactcaattgtt 210

                    
Query: 539 ctaaaaaaa 547
           |||||||||
Sbjct: 209 ctaaaaaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 948
Length adjustment: 10
Effective length of query: 537
Effective length of database: 938
Effective search space:   503706
Effective search space used:   503706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)