Query= MSMg01no387_e08.b1 MSMg01no387_e08.b1 CHROMAT_FILE:
MSMg01no387_e08.b1 PHD_FILE: MSMg01no387_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:16 2005
(345 letters)
>mm_chr4_33601865_33602609
Length = 745
Score = 636 bits (329), Expect = 0.0
Identities = 341/345 (98%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 1 gaattccccaatcatttgctgaaaggtgtggtaggtagaagtcatttgccaggctaactc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattccccaatcatttggtgaaaggtgtggtaggtagaagtcatttgccaggctaactc 260
Query: 61 tttaaatagcaacaatggatacaaaacttttaaattagaacaacaggataatttgatcat 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tttaaatagcaacaatggatacaaaacttttaaattaaaacaacaggataatttgatcat 320
Query: 121 ttttcacaaacatgtgccgatgctctactgtgtgtcagctgataaaagactgcaacacac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 321 ttttcacaaacatgtgccgatgctctactgtgtgtcagctgataaaagactg-aa-acac 378
Query: 181 acacacacacacacacacacacacacacacacacacacactgtgcttaggagtggaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acacacacacacacacacacacacacacacacacacacactgtgcttaggagtggaaaga 438
Query: 241 gacagcaggcaagcactggctgagtgatttagcagttaaaggggaggcatatgaggttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gacagcaggcaagcactggctgagtgatttagcagttaaaggggaggcatatgaggttca 498
Query: 301 cttgaatagtggccactatgcttttacggcaagtgtggagaacca 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttgaatagtggccactatgcttttacggcaagtgtggagaacca 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_e08.g1 MSMg01no387_e08.g1 CHROMAT_FILE:
MSMg01no387_e08.g1 PHD_FILE: MSMg01no387_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:16 2005
(405 letters)
>mm_chr4_33781811_33782615
Length = 805
Score = 723 bits (374), Expect = 0.0
Identities = 386/390 (98%)
Strand = Plus / Minus
Query: 1 tttatcaatacatgtcagttatgtagaatcaggattgtcattgctgtattttcatacatt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tttatcaatacacgtcagttatgtagaatcaggattgtcattgctgtattttcatacatt 331
Query: 61 catacagcaaactttgatcatatcaatccctgttgcctgacttcattctccccttcccta 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 330 catacagcaaactttgatcatatcaatccctgttgcccgacttcattctccccttcccta 271
Query: 121 gccctgtctccttcctcttctcaagtatcccccatacaatcttcatatcacttctctcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gccctgtctccttcctcttctcaagtatcccccatacaatcttcatatcacttctctcat 211
Query: 181 tatgttccccaagatacaatactgtctttccgaatctggtttatctgggttaatataatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tatgttccccaagatacaatactgtctttccgaatctggtttatctgggttaatataatg 151
Query: 241 atctccacctctgtctttgcaaatggcatggtctcctttgtggttaatgggtaggaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atctccacctctgtctttgcaaatggcatggtctcctttgtggttaatgggtaggaatta 91
Query: 301 gtcaaacacatgagtttctgtccagcttgggcttttgccatgggtggtcaccctttgctg 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gtcaaacacatgagtttctgtacagcttgggcttttgccatgggtggtcaccctttgctg 31
Query: 361 ttgttgctgcttggttatctggggcctcct 390
||||||||||||||||| ||||||||||||
Sbjct: 30 ttgttgctgcttggttagctggggcctcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
