Query= MSMg01no389_d08.b1 MSMg01no389_d08.b1 CHROMAT_FILE:
MSMg01no389_d08.b1 PHD_FILE: MSMg01no389_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:44 2005
(461 letters)
>mm_chr4_26002291_26003156
Length = 866
Score = 516 bits (267), Expect = e-150
Identities = 320/345 (92%), Gaps = 14/345 (4%)
Strand = Plus / Minus
Query: 131 cagactggaagcatgtgttgcatatatacatatcttataaaaacattaaattagtatgta 190
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 866 cagactggaagcatgtgttgcatatatacatatcttataaaaacattaaactagtatgta 807
Query: 191 taatgaactccttagacttaatataatatataaaacccagtgttaaaaaaatagttttat 250
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 taacgaactccttagacttaatataatatataaaacccagtgttaaaaaaatagttttat 747
Query: 251 tctttacaccaaaagctacatataaataa--------atagatagatagatagatagata 302
| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 746 ccaggacaccaaaagctacatataaataaataaattgatagatagatagatagatagata 687
Query: 303 gatagatagat-gatagataaaatttcaaagtctgaagaggcaccttagtaaacaaga-- 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gatagatagatagatagataaaatttcaaagtctgaagaggcaccttagtaaacaagata 627
Query: 360 ---tatagaatggagcataattttagagaaatatgtgtcttattatatttcatcatgaaa 416
||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 626 tagtatagaatggagcataattttagagaaatatgtgttttattatttttcatcaagaaa 567
Query: 417 atgaaaatttgaaaatcaagtagtacctgatatgtgctagaccag 461
|||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 566 atgaaaatttgaaaatgaaatagtacctgatatgtgctagaccag 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 866
Length adjustment: 10
Effective length of query: 451
Effective length of database: 856
Effective search space: 386056
Effective search space used: 386056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_d08.g1 MSMg01no389_d08.g1 CHROMAT_FILE:
MSMg01no389_d08.g1 PHD_FILE: MSMg01no389_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:44 2005
(514 letters)
>mm_chr4_25834969_25835882
Length = 914
Score = 986 bits (510), Expect = 0.0
Identities = 513/514 (99%)
Strand = Plus / Plus
Query: 1 ccaattgagctcaatattcaaactgtactaattcaaccagcaatgttcccatgccagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaattgagctcaatattcaaactgtactaattcaaccagcaatgttcccatgccagaat 260
Query: 61 ttgtttcacaatgacaatctcccatctacgtactaactagacctgaccctgattagcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtttcacaatgacaatctcccatctacgtactaactagacctgaccctgattagcttc 320
Query: 121 caagatcagacatcaggtatattcaggatgatactgcatagaaaatatgtcctttggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagatcagacatcaggtatattcaggatgatactgcatagaaaatatgtcctttggaga 380
Query: 181 ggcaacatcactaacctggatgtaaccacagaagctgagaaagatgaaacaaactatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcaacatcactaacctggatgtaaccacagaagctgagaaagatgaaacaaactatggg 440
Query: 241 aggagttggaaagaagctcttgagacggagatagtaacacacatggattatgaaagggaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggagttggaaggaagctcttgagacggagatagtaacacacatggattatgaaagggaa 500
Query: 301 aatggactggggagaagatttaatgagaaaatagaggactaggatactataggtggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatggactggggagaagatttaatgagaaaatagaggactaggatactataggtggaaag 560
Query: 361 ggagagagaagaactaaattacaatagaattcatgaaaatgccataaggaaacaaagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagagagaagaactaaattacaatagaattcatgaaaatgccataaggaaacaaagtat 620
Query: 421 tattataagtttacttaaaatgcataagctttatgtgtgtgtgtgtatttatgtaaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattataagtttacttaaaatgcataagctttatgtgtgtgtgtgtatttatgtaaatgt 680
Query: 481 gtctgactgttccggtgtatgtgtcaatatctgt 514
||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctgactgttccggtgtatgtgtcaatatctgt 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
