Query= MSMg01no389_f05.b1 MSMg01no389_f05.b1 CHROMAT_FILE:
MSMg01no389_f05.b1 PHD_FILE: MSMg01no389_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:53 2005
(331 letters)
>mm_chr4_87681991_87682721
Length = 731
Score = 605 bits (313), Expect = e-177
Identities = 322/327 (98%), Gaps = 4/327 (1%)
Strand = Plus / Minus
Query: 5 gaattccactctgactcttatcattcttacagtcttgtacttgacatatggtccagtttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gaattccactctgactcttatcattcttacagtcttgtacttgacatatggtccagtttt 578
Query: 65 ggtaaacagatgtatggatgtatttcatcaaacaaacaaacaaacaaacacccagcaggc 124
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 577 ggtaaacagatgtatggatgtatttcat----caaacaaacaaacaaacacccagcaggc 522
Query: 125 tatggagggggaagccttagttattctgaatgtgcagctaccaaaatgtctactgtctgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tatggagggggaagccttagttattctgaatgtgcagctaccaaaatgtctactgtctgt 462
Query: 185 tctagtagctaatagttttttcatgggccttccccttccctgacaaacccatatagccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tctagtagctaatagttttttcatgggccttccccttccctgacaaacccatatagccaa 402
Query: 245 ggatggacagtggctaatttttgatgattcgattcgttgagtgtgtgtgtaccaacaacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggatggacagtggctaatttttgatgattcgattcgttgagtgtgtgtgtaccaacaacc 342
Query: 305 tgacatagtgaatgggcaaaatttact 331
|||||||||||||||| ||||||||||
Sbjct: 341 tgacatagtgaatgggtaaaatttact 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_f05.g1 MSMg01no389_f05.g1 CHROMAT_FILE:
MSMg01no389_f05.g1 PHD_FILE: MSMg01no389_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:53 2005
(470 letters)
>mm_chr4_87518915_87519784
Length = 870
Score = 857 bits (443), Expect = 0.0
Identities = 464/471 (98%), Gaps = 2/471 (0%)
Strand = Plus / Plus
Query: 1 tcccaaattgaaacatgccctctcagtgggagggaggacatgcatgagacgcagggcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccaaattgaaacatgccctctcagtgggagggaggacatgcatgagacgcagggcact 260
Query: 61 cgtagaacaagactcatgagcacctcagtaaggtcctaccagcagctgcgagcaattgct 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catagaacaagactcatgagcacctcagtaaggtcctaccagcagctgcgagcaattgct 320
Query: 121 cagggtggggagactcttgaagaggggctcttgggttgaccagggagctccatggaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagggtggggagactcttgaagaggggctcttgggttgaccagggagctccatggaagcc 380
Query: 181 aagttcaggagttgttacccatgcttagctggcattttgatgatgcagctgactttaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagttcaggagttgttacccatgcttagctggcattttgatgatgcagctgactttaaat 440
Query: 241 taactactttcatgaaaagtaacggcagtaactcattagttctctgagtgaagct-gagg 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 441 taactacattcatgaaaagtaacggcagtaactcattagttctctgagtgaagcttg-gg 499
Query: 300 caggaacatttctttggcccattttcagtacctgttcaaggaagaagctgtttgttccta 359
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 caggaacatttctttggcccgttttcagtacctgctcaaggaagaagctgtttgttccta 559
Query: 360 tgtacataggataagtagtacaggcagcttggtcaaaataaacttgacccacttagacat 419
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatacataggataagtagtacaggcagcttggtcaaaataaacttgacccacttagacat 619
Query: 420 taaggctgttccaaccagatatgccatttcagatgggcacctacttaagag 470
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taaggctgttccaaccagatatgccatttcagatgggcacctacttaagag 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
