Query= MSMg01no391_b02.b1 MSMg01no391_b02.b1 CHROMAT_FILE:
MSMg01no391_b02.b1 PHD_FILE: MSMg01no391_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:10 2005
(437 letters)
>mm_chr4_126620025_126620861
Length = 837
Score = 806 bits (417), Expect = 0.0
Identities = 429/433 (99%)
Strand = Plus / Plus
Query: 5 gaattcactctgtatttcaggctgctgaccttgcttgcactcatggtgacctgctaggat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactctgtaaaccaggctgctgaccttgcttgcactcatggtgacctgctaggat 264
Query: 65 taaaagtgtgcaccaccactgctcagcttactatgaaatattttaaagagtgttattgta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaaagtgtgcaccaccactgctcagcttactatgaaatattttaaagagtgttattgta 324
Query: 125 taacaatgtcctaaaacattcagtctcactctttgaattacagaggtgggtggggagggt 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 taacaatgtcctaaaacattcagtctcactgtttgaattacagaggtgggtggggagggt 384
Query: 185 gcactggaatttagttacccatggagatgagaggcacaggatattttaattagagaacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcactggaatttagttacccatggagatgagaggcacaggatattttaattagagaacat 444
Query: 245 ctctctggtctctacagagaagtgaagactcaagatgttctaaatggagtctctgtactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctctctggtctctacagagaagtgaagactcaagatgttctaaatggagtctctgtactg 504
Query: 305 gggaagttaacaattcaggagcttcatcaaatccctaaaacacatcagatatactagacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggaagttaacaattcaggagcttcatcaaatccctaaaacacatcagatatactagacc 564
Query: 365 cctactctctacctcacggtaagcataagaactactcttgctgggcagtggtggcgcatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctactctctacctcacggtaagcataagaactactcttgctgggcagtggtggcgcatg 624
Query: 425 cctttaatcccag 437
|||||||||||||
Sbjct: 625 cctttaatcccag 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_b02.g1 MSMg01no391_b02.g1 CHROMAT_FILE:
MSMg01no391_b02.g1 PHD_FILE: MSMg01no391_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:10 2005
(479 letters)
>mm_chr4_126811546_126812425
Length = 880
Score = 611 bits (316), Expect = e-179
Identities = 387/420 (92%), Gaps = 20/420 (4%)
Strand = Plus / Minus
Query: 1 attctataaattcacaaatatgtagaggtttgtgagcaaaaacatccattacagcattgt 60
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 420 attctataaattcacaaatatgtagaggtttgtgagcaaagacatccactacagcattgt 361
Query: 61 ttttaacagtaaaataagagaaacaactgttcat-cgcggggattcatacacgggcattt 119
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 360 ttttaacagtaaaataagagaaacaactgttcatccgcggggattcatacacgggcattc 301
Query: 120 atccgcaggggtcaacagagcaaaatagggacaatgtaatgaaaagagcaagctgtacat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atccgcaggggtcaacagagcaaaatagggacaatgtaatgaaaagagcaagctgtacat 241
Query: 180 gtgcaggtattggagagctgtacaaaataacttgaaagcaattgggtggtggtggtgcac 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 240 gtgcaggtattggagagctgtacaaaataacttgaaagcagccgggtggtggtggtgcac 181
Query: 240 ccctttaatcccagcacttgggaggcagaggcaggcagatttctgagttcgaggctagat 299
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 180 gcctttaatcccagcacttgggaggcagaggcaggcggatttctgagttcgaggctagac 121
Query: 300 tggtctac-aagtgagttccaagacagccaggactatacagagaaaccctgtctcgaaaa 358
|||||||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||
Sbjct: 120 tggtctacaaagtgagttacaggacagccagggctatgcagagaaaccctgtctcgaaaa 61
Query: 359 a---------------aaa-aaat-aat-aataacttgaaagcaaattacagaagagtgt 400
| ||| |||| ||| |||||||||||||||||||||||||||||||
Sbjct: 60 aactaactaactaaataaataaataaataaataacttgaaagcaaattacagaagagtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
