Query= MSMg01no391_e12.b1 MSMg01no391_e12.b1 CHROMAT_FILE:
MSMg01no391_e12.b1 PHD_FILE: MSMg01no391_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:26 2005
(436 letters)
>mm_chr4_13378322_13379157
Length = 836
Score = 783 bits (405), Expect = 0.0
Identities = 428/441 (97%), Gaps = 10/441 (2%)
Strand = Plus / Plus
Query: 1 agctaaaattccctcctgtgtcgaggaggtttgctgcgctacttaatgcatccttagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctaaaattccctcctgtgtcgaggaggtttgctgcgctacttaatgcatccttagcag 260
Query: 61 cctggcacaccagttccctggtaccatttaatgttaaataacactcccaagactgtgtga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actggcacaccagttccctggtaccatttaatgttaaataacactcccaagactgtgtga 320
Query: 121 ggaaataagctatgtgcaaaatgtcacattcggggggagggggaaaaacaattatgccga 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ggaaataagctatgtgcaaaatgtcacatttggggggagggggaaaaacaattatgccga 380
Query: 181 tggcatgcaattcacgtcaacctcttttgagataattgaagaaagacaacagaacacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcatgcaattcacgtcaacctcttttgagataattgaagaaagacaacagaacacaca 440
Query: 241 cagta-----ttttttaaacgggctggcaatggggaacagaaaagaatctttctatttct 295
||||| | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtagccaat-----aaatgggctggcaatggggaacagaaaagaatctttctatttct 495
Query: 296 aaattttcttgtcacacccaaaccagcttttttttttctgagtcctcttgataagcgttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaattttcttgtcacacccaaaccagcttttttttttctgagtcctcttgataagcgttt 555
Query: 356 gtcataagctttactgtaccatgaagttatgattaatatcacagctcaagtacagcggct 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtcataagctttactgtaccatgaagttatgattaatatcacagctcaagtacagcggct 615
Query: 416 tgaaagaccacattcattttc 436
|||||||||||||||||||||
Sbjct: 616 tgaaagaccacattcattttc 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_e12.g1 MSMg01no391_e12.g1 CHROMAT_FILE:
MSMg01no391_e12.g1 PHD_FILE: MSMg01no391_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:26 2005
(413 letters)
>mm_chr4_13515759_13516573
Length = 815
Score = 567 bits (293), Expect = e-166
Identities = 349/375 (93%), Gaps = 16/375 (4%)
Strand = Plus / Minus
Query: 48 gcttgtaaccccagtaccggggagggagagatcaatggattgttggtctcagtggttagc 107
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gcttgtaaccccagtactggggagggagagatcaatggattgttggtctcagtggttagc 756
Query: 108 caaactagtctactgtgctaactctaaaacaataagagatactgtctacgagacaaaatc 167
|| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 755 taacctagtctactgtgctaactctaaaacaataagagatactgtctaagagacaaaatc 696
Query: 168 aaacctttt----ccaaggtggatagcatctaaagaaatgacactaaggttgaggtttgg 223
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aaacc----aaacccaaggtggatagcatctaaagaaatgacactaaggttgaggtttgg 640
Query: 224 caaccatatacatgtgcactgagttgcatgcacacacacaagcatccctgccccat---- 279
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 639 caaccatatacatgtgcacagaggtgcatgcacacacacaagcatccctgccccattaaa 580
Query: 280 catatttacacaactcagcttccttttctccaaataatctgtaaggcatggggtcaccct 339
|| | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 579 caaa---acacaactcagcttcctttactccaaacaatctgtaaggcatggggtcaccct 523
Query: 340 atatgtggaaattcggatgcgaatgagctcagggctatcttgtttctataaatattgtat 399
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 522 atatgtggaaattcggatgcaaatgagctcagggctatcttgtttctataaatattgtat 463
Query: 400 gttttt-cctagagc 413
|||||| ||||||||
Sbjct: 462 gttttttcctagagc 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 815
Length adjustment: 9
Effective length of query: 404
Effective length of database: 806
Effective search space: 325624
Effective search space used: 325624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
