NTACTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNG
NGGAATTNNGGTCTTTCCCGGCAAGGGTATTGGGGAAAACATGGGTTATG
TAATCAGGACAGACACCTGGGTTAAATCTTGCCCATATGTGGAGATGGGT
TAAGTCTGTTTTCTTACCCTGAAAATAAACAACTAAAAATTTATGCACAT
TAAATGACATAGGAATAAAGCAAGAAACTCTTAAGTCTGTGTGCTCAGGA
ACCACCAGCCACTCCCTCATCTTCACCATGCAGCTGTGCGATCCACTTCT
AAAAAATTAGCCTCGAAGATTGCTGCTTATCCTCTGCTCCAGTTCTGTGA
AAGGACAAAATGGAAGTCACATTTCCCCTTTTCTTCCAGGATTAAAACAT
GTCTCTAGATCAAAATGCTCACATCTAAAACAATGCCTGAAGTATTCTGC
ATATTCCTTATCATGAGAACAAGATAACTGGTTTTTTGTTTTTTGTTTTT
TAAAAGCACAAAAGAAAGCATAAGGGACACTAATTACCGTGCCCTGGTAA
CAGTGTCAAACAGCAAACCTTCAGGAAGTCCTCTCCATTTCATCCCTAAC
CTCTATCATCAGGAAGCATCCATTACTATATGTTAATAAATCTCATTGTA
TAGATTACGTAACCGAGCCCCTACGCCTATTATTATTGCATGTCTTCCCT
TTCCCCAACATCAAATAAACTCCCGTCATTAAACAATCTGTCTTACCCAA
ATACTTGG

TTTTCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGAGAACGTTCTTATGAA
GTGCTAAGAGAATACTAGAATCAAGAGGCACCCAGGGAGGGCCAGGAAGA
AGTTGACTGCTTCTGGAATGAAGGCGGGTCCTCTGCACAGCCGTAGCTGC
CCCTGCAGGAGTGATGTGAATGGGGATTGCTGACCGCTGTGCCTGTAAGC
GCTGGCTTGAGAGTGGGTGTCAGGCAGTCTGGGTTTAAGTGCAGCCTGTG
CTACAGCAGGGGCACTGACTCGATGTCTTGGGCTTTACGTTCGCTTCCTT
CTGGCTGCAAGCCACCGTGGGACTGGGGATGCGTTTGAGGAGGGCATAGC
AGGAAATCTTTGCCTGTTTGATTCTTTTGCCTGTGTGAGTCCTTCAAGGC
ATTCCTGCAATTCTCTGGGTTAAACGCTCCAATTTTATTCAGAGGCATTT
TTCTTCCTTTGGATCTGAAGATTGGAAGTAAAGGATTCGAGAAGACCCTT
TCTTTCAATATCCTTTCCGGTCGCTCCTGACGATCCCTAAATCGGTTCTT
TTTTGTTCAAATCTCTCCTTCCTGCTCTAATTATAGCTCCGTCCCCTCAG
GACACATCCTCCTAATTATTTTTTGCGTCGTTCTTACGCGCTCATTCTTA
TTTATCCTTAGAACGCCCCGTTCCATACCTTACCATATCCTTTAAAATAT
CACGGCTCTCTCTCTCCTCTCCATATTCACCACTAATTCTCTACGCTTAT
TTCAGC

Query= MSMg01no394_c10.b1 MSMg01no394_c10.b1 CHROMAT_FILE:
MSMg01no394_c10.b1 PHD_FILE: MSMg01no394_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:26 2005
         (411 letters)



>mm_chr4_54075498_54076308
          Length = 811

 Score =  748 bits (387), Expect = 0.0
 Identities = 405/411 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggtattggggaaaacatgggttatgtaatcaggacagacacctgggttaaatcttgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agggtattggggaaaacatgggttatgtaatcaggacagacacctgggttaaatcttgcc 552

                                                                       
Query: 61  catatgtggagatgggttaagtctgttttcttaccctgaaaataaacaactaaaaattta 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gatatgtggagatgggttaagtctgttttcttaccctgaaaataaacaactaaaaattta 492

                                                                       
Query: 121 tgcacattaaatgacataggaataaagcaagaaactcttaagtctgtgtgctcaggaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgcacattaaatgacataggaataaagcaagaaactcttaagtctgtgtgctcaggaacc 432

                                                                       
Query: 181 accagccactccctcatcttcaccatgcagctgtgcgatccacttctaaaaaattagcct 240
           |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 431 accagccactccctcatcttcaccatgcagctgtgccatccacttctaagaaattagcct 372

                                                                       
Query: 241 cgaagattgctgcttatcctctgctccagttctgtgaaaggacaaaatggaagtcacatt 300
           |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 371 cgaagattgctgcttaccctccgctcaagttctgtgaaaggacaaaatggaagtcacatt 312

                                                                       
Query: 301 tccccttttcttccaggattaaaacatgtctctagatcaaaatgctcacatctaaaacaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tccccttttcttccaggattaaaacatgtctctagatcaaaatgctcacatctaaaacaa 252

                                                              
Query: 361 tgcctgaagtattctgcatattccttatcatgagaacaagataactggttt 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgcctgaagtattctgcatattccttatcatgagaacaagataactggttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space:   322404
Effective search space used:   322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no394_c10.g1 MSMg01no394_c10.g1 CHROMAT_FILE:
MSMg01no394_c10.g1 PHD_FILE: MSMg01no394_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:26 2005
         (401 letters)



>mm_chr4_53899064_53899864
          Length = 801

 Score =  721 bits (373), Expect = 0.0
 Identities = 394/401 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagagaacgttcttatgaagtgctaagagaatactagaatcaagaggcacccagggagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagagaacgttcttatgaagtgctaagagaatactagaatcaagaggcacccagggagg 260

                                                                       
Query: 61  gccaggaagaagttgactgcttctggaatgaaggcgggtcctctgcacagccgtagctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccaggaagaagttgactgcttctggaatgaaggcgggtcctctgcacagccgtagctgc 320

                                                                       
Query: 121 ccctgcaggagtgatgtgaatggggattgctgaccgctgtgcctgtaagcgctggcttga 180
           |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||
Sbjct: 321 ccctgcaggagtgatgtgaatggatattgctgaccgctgtgcctggaagcgctggcttga 380

                                                                       
Query: 181 gagtgggtgtcaggcagtctgggtttaagtgcagcctgtgctacagcaggggcactgact 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 gagtgggtgtcaggcagtctgggtttaagtgcagcctgtgctacggcaggggcactgact 440

                                                                       
Query: 241 cgatgtcttgggctttacgttcgcttccttctggctgcaagccaccgtgggactggggat 300
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 cgatgccttgggctttacgttcgcttccttctggctccaagccaccgtgggactggggat 500

                                                                       
Query: 301 gcgtttgaggagggcatagcaggaaatctttgcctgtttgattcttttgcctgtgtgagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcgtttgaggagggcatagcaggaaatctttgcctgtttgattcttttgcctgtgtgagt 560

                                                    
Query: 361 ccttcaaggcattcctgcaattctctgggttaaacgctcca 401
           |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 ccttcaaggcattccttcaattctctgggttaaacgctcca 601


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space:   310464
Effective search space used:   310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)