Query= MSMg01no396_b22.b1 MSMg01no396_b22.b1 CHROMAT_FILE:
MSMg01no396_b22.b1 PHD_FILE: MSMg01no396_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:10 2005
(398 letters)
>mm_chr4_47130764_47131561
Length = 798
Score = 688 bits (356), Expect = 0.0
Identities = 386/398 (96%), Gaps = 5/398 (1%)
Strand = Plus / Plus
Query: 6 ggaattccccatttgttagcaccccagacctcccccattttcacccctctggtctgatca 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattccccatttgtgagcaccccagacctcccccattttcacccctctggtctgatca 265
Query: 66 tgtatgtaccgtcctttcctctccccttgggcgtctgggccctgggtccgcaaggtcagg 125
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 266 tgtatgtaccgtcctttcctctccccttgggcatctgggccctgggtccgcaaggtcagg 325
Query: 126 actggaaggcacctggaaattgtcaggggtgagctactgtttgttgtttaattaactggg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actggaaggcacctggaaattgtcaggggtgagctactgtttgttgtttaattaactggg 385
Query: 186 atgtcttgctgcatgtggagatcggagaacagttctcaggagtggcttctcttctgtcac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgtcttgctgcatgtggagatcggagaacagttctcaggagtggcttctcttctgtcac 445
Query: 246 tctgtgggacccggggaccaagctccggtcattagacctgtgtggacatgcttgcgcc-a 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 446 tctgtgggacccggggaccaagctccggtcattagacctgtgtggacatgcttgcaccca 505
Query: 305 ttgaacatctcgccagtcagttaattgtggggaatgggcat----atgtggggtttctgt 360
|||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 506 ttgagcatcttgccagtcagttaattgtggggaatgggcatgcatatgtggggtttctgt 565
Query: 361 gtcttagttttggccagcattttcagattacttggcct 398
||||||||||| ||||| ||||||||||||||||||||
Sbjct: 566 gtcttagtttttgccagtattttcagattacttggcct 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_b22.g1 MSMg01no396_b22.g1 CHROMAT_FILE:
MSMg01no396_b22.g1 PHD_FILE: MSMg01no396_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:10 2005
(384 letters)
>mm_chr4_47233610_47234393
Length = 784
Score = 735 bits (380), Expect = 0.0
Identities = 383/384 (99%)
Strand = Plus / Minus
Query: 1 acctgatctgacctcttcgtttcccagattgggaaagtgagacccaggaatgtatagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acctgatctgacctcttcgtttcccagattgggaaagtgagacccaggaatgtatagaaa 525
Query: 61 cttacctgggcagacaaagagcaagagaatgccaacacaggctctggctagtctctgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cttacctgggcagacaaagagcaagagaatgccaacacaggctctggctagtctctgtta 465
Query: 121 caaccctcctcctggccatagctgcctcctgcccatggtgagcttgaggggcacacgggt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 caatcctcctcctggccatagctgcctcctgcccatggtgagcttgaggggcacacgggt 405
Query: 181 tccctggttgggactaacctgtggcaaagttgcatgaaggactccttcaacaagagcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tccctggttgggactaacctgtggcaaagttgcatgaaggactccttcaacaagagcagg 345
Query: 241 tagcccaagttcagcccacaggccagcccaatgctaagtgctttgctcttttcaccctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tagcccaagttcagcccacaggccagcccaatgctaagtgctttgctcttttcaccctga 285
Query: 301 tctcatgccttcagaacatcaggtgggactccccaaggatttagaacaaaaggtctgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tctcatgccttcagaacatcaggtgggactccccaaggatttagaacaaaaggtctgaga 225
Query: 361 gaccaggctagagtggcacttagt 384
||||||||||||||||||||||||
Sbjct: 224 gaccaggctagagtggcacttagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
