Query= MSMg01no400_o20.b1 MSMg01no400_o20.b1 CHROMAT_FILE:
MSMg01no400_o20.b1 PHD_FILE: MSMg01no400_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:24 2005
(413 letters)
>mm_chr4_132791449_132792261
Length = 813
Score = 758 bits (392), Expect = 0.0
Identities = 407/412 (98%)
Strand = Plus / Minus
Query: 2 ggaattcaccctaccgtgcaagctcctgtaaattctcattcccatgccagaacgcagact 61
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggaattcaccctaccgaggaagctcctgtaaattctcattcccatgccagaacgcagact 554
Query: 62 cctgtctccccactgctctgtagcagtcaggagtggaagaagtccacccctgcacctgct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cctgtctccccactgctctgtagcagtcaggagtggaagaagtccacccctgcacctgct 494
Query: 122 gccaatccaaactggcctggggcaggggaagccagggaagtgcagctaggggctggatgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gccaatccaaactggcctggggcaggggaagccagggaagtgcagctaggggctggatgg 434
Query: 182 gtgtgagggctggctggacccttcccttctctttgcattgtggggagggggcttacggct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtgtgagggctggctggacccttcccttctctttgcattgtggggagggggcttacggct 374
Query: 242 caaatgtgactcctctgagtgagtttagcctatgaatattgtatgataaatccagtttct 301
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 373 caaatgtgactcctctgagtgagtttagcctatgaataatgaatgataaatccagtttct 314
Query: 302 tcattaacttttgttgacactcaactcatgacaaaaatctcgtaagctccagggaagatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcattaacttttgttgacactcaactcatgacaaaaatctcgtaagctccagggaagatt 254
Query: 362 ggaatgaatatatacatatatatatactgtcgccagttacccatttaatttg 413
|||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggaatgaatatatatatatatatatactgtcgccagttacccatttaatttg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_o20.g1 MSMg01no400_o20.g1 CHROMAT_FILE:
MSMg01no400_o20.g1 PHD_FILE: MSMg01no400_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:24 2005
(313 letters)
>mm_chr4_132569881_132570592
Length = 712
Score = 559 bits (289), Expect = e-164
Identities = 307/313 (98%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 1 atttcccctgtgttgatagctggagtaatcccccgagactggtgaacttctggccccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttcccctgtgttgatagctggagtaatcccccgagactggtgaacttctggccccaga 260
Query: 61 gcacccacccttcagaggtggcagtgactatagaggggatgggcatccacccaaacctgt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gcacccacccttcagaggtggcagtgactagagaggggatgggcatccacccaaacctgt 320
Query: 121 gactcatctcccacttggtttggcatgggagcaggtgcccaggtggggcagacattgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactcatctcccacttggtttggcatgggagcaggtgcccaggtggggcagacattgccc 380
Query: 181 ccctcccttggcatctccagggtgctgtttgaccattcaggcacctccctggccagtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctcccttggcatctccagggtgctgtttgaccattcaggcacctccctggccagtgcc 440
Query: 241 taagctgtgtttgtgttccccccagcgacagtcccctggtgggctttcttctccgcctgg 300
||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 taagctgtgcctgtgc-ccccccagggacagtcccctggtgggctttcttctccgcctgg 499
Query: 301 gctgcaggcccac 313
|||||||||||||
Sbjct: 500 gctgcaggcccac 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
