Query= MSMg01no406_p20.b1 MSMg01no406_p20.b1 CHROMAT_FILE:
MSMg01no406_p20.b1 PHD_FILE: MSMg01no406_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:30 2005
(452 letters)
>mm_chr4_137753608_137754459
Length = 852
Score = 277 bits (143), Expect = 1e-78
Identities = 149/151 (98%)
Strand = Plus / Plus
Query: 184 cagaagttggacttcacggaatccgaagggccctgctcctctgaggcactgtcaaagaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagaagttggacttcacggaatccgaagggccctgctcctctgaggcactgtcaaagaag 443
Query: 244 gagctgtctgccgaggagctgtctcagcgcctggaaaagctcatcatggaggagaaagca 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagctgtctgccgaggagctgtctcagcgcctggaaaagctcatcatggaggagaaagcg 503
Query: 304 gacgacgagcggatctttgactgggtggagg 334
|| ||||||||||||||||||||||||||||
Sbjct: 504 gatgacgagcggatctttgactgggtggagg 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_p20.g1 MSMg01no406_p20.g1 CHROMAT_FILE:
MSMg01no406_p20.g1 PHD_FILE: MSMg01no406_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:30 2005
(355 letters)
>mm_chr8_115286704_115287458
Length = 755
Score = 586 bits (303), Expect = e-172
Identities = 344/369 (93%), Gaps = 20/369 (5%)
Strand = Plus / Plus
Query: 6 taccttctagctatcggccacaataaatcttccttctttt--aagagttcttttggtgtg 63
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 186 taccttctagctatcggccacaataaatcttccttcttttaaaagagttcttttggtgtg 245
Query: 64 tgtgtgtgtg-----------------g-gtaggtattcatagaggcctgaagagggttt 105
|||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 246 tgtgtgtgtgtgtgtgtgtgtgtgtatgtgtaggtattcatagaggcctgaagagggttt 305
Query: 106 cagggcctctggagttacaaggacttacagtagtttgtgagctgctaaattcaggtgctg 165
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 306 cagggcctctggagttacaaggacttacagtagtttgtgagctgctaagttcaggtgctg 365
Query: 166 ggaactgaactccggtcctccagtagagcagcaagcattattaatcactaagctattatt 225
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggaattgaactccggtcctccagtagagcagcaagcattattaatcactaagctattatt 425
Query: 226 ctagctttttaaactttttctttcttaactataaaaataactaataaggttacaatagaa 285
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 426 ctagctttttaaactttttctttcttaactataaaaataactaataaggtcgcaatagaa 485
Query: 286 ttgagttgtgtaatatacctaataaaggaaagcgtacaaattgcacggttccttcccttc 345
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 486 ttgagttgtgtaatatacctaataaaggaaagtgtacaaattgcacggttccttcccttc 545
Query: 346 ctcctttaa 354
|||||||||
Sbjct: 546 ctcctttaa 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
