Query= MSMg01no408_l24.b1 MSMg01no408_l24.b1 CHROMAT_FILE:
MSMg01no408_l24.b1 PHD_FILE: MSMg01no408_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:49 2005
(423 letters)
>mm_chr4_44306770_44307592
Length = 823
Score = 654 bits (338), Expect = 0.0
Identities = 347/350 (99%)
Strand = Plus / Minus
Query: 74 tatgttctcccaaacatctgagcatagtccattatccttatcacaattgttacttgcaag 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tatgttctcccaaacatctgagcatagtccattatccttatcacaattgttacttgcaag 586
Query: 134 acatcaggctttctgactactggtatttcttcatcgaaggagagattggggagggttaat 193
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 585 acatcaggctttctgaccactgttatttcttcatcgaaggagagattggggagggttaat 526
Query: 194 ggattctcacctgagctcctacctgttccccatctgcctctaagccctctgcatgtcact 253
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 525 ggattctcacctgagctcctacctgttccccgtctgcctctaagccctctgcatgtcact 466
Query: 254 gtacccctattgtacaagaactggaggtagagcacattgattatgggtgttaaactggag 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gtacccctattgtacaagaactggaggtagagcacattgattatgggtgttaaactggag 406
Query: 314 agaggagacaatctacgcagctacagggaagtcaccctccatgttggggtgttcctgtcc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agaggagacaatctacgcagctacagggaagtcaccctccatgttggggtgttcctgtcc 346
Query: 374 gtggtgctgttgcttcataagtgacccctcaccacacatgctctctaggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtggtgctgttgcttcataagtgacccctcaccacacatgctctctaggt 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_l24.g1 MSMg01no408_l24.g1 CHROMAT_FILE:
MSMg01no408_l24.g1 PHD_FILE: MSMg01no408_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:49 2005
(408 letters)
>mm_chr4_44281021_44281828
Length = 808
Score = 673 bits (348), Expect = 0.0
Identities = 394/414 (95%), Gaps = 13/414 (3%)
Strand = Plus / Plus
Query: 4 ctctgcagcccacaggaacccacacaatggaagacgagaaccaacttgcaag-------t 56
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 199 ctctgcagcccacaggaacccacacaatgggagacgagaaccaacttgcaagtttttttt 258
Query: 57 tttgtgtgtgcgtgtgtgtgtgtgtgcaccccccaatgatgatgatggtga-taatgata 115
||||||||| ||||||||||||| |||||||||||||||||||||||||| | || ||
Sbjct: 259 tttgtgtgt--gtgtgtgtgtgtgcgcaccccccaatgatgatgatggtgact-attatt 315
Query: 116 acaactattatttaacagttagtacaaagagtcccaaacaattgtgttagttatgctttg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 acaactattatttaacagttagtacaaagagtcccaaacaattgtgttagttatgctttg 375
Query: 176 tcctcccaaggtaaagtggactttaaccagtgtagctgctcaggccctgatgagaagaca 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcctcccaaggtaaagtggactttaaccagtgtagctgctcaggccctgatgagaagaca 435
Query: 236 tcatgtaatgtgaatgtgtgatcagacattcggcatactgagcagacccccactaaacgc 295
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 436 tcatgtaatgtgaacgtgtgatcagacattcggcatactgagcagacccgcactaaacgc 495
Query: 296 agtcagaggtgaatactttattgagtgggagccaaaggctgttagatagacaaatcaggc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 496 agtcagaggtgaatactttattgagtgggagccaaaggctgttagatagacaagtcaggc 555
Query: 356 ctgcatttgggaa-tgtgatggaaacgaccccacgttcaaatgtatactcgtcg 408
|||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctgcatttgg-aagtgtgatggaaacgaccccacgttcaaatgtatactcgtcg 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
