NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTACCTTTTAACCCCATGATAAAAGCAGCCTTTGTCTGTAGC
CAGCCACATAGGAAGTCCATGAATGCTCTTCTACATTTTGATTAGAATAA
ACAGGACACGAGAAGTACAAATTACTTTTAAGTACCACTGAGATGGTTTT
AACAAAGAGGTTGTTACAGCCATTGTAAGAGGATGAAACAATGCACATCT
TCCCCGTACTTACAGGGTCTAAGCCAGTCAATCCAAGTGAATCTATCTAC
ATGAAAATGACCCCTGGATGTTTTGTAGCAAAACAACACATGATACAAGA
AGCACTAAAAATTATACATTTGAATTAATATATATTTTTCAGAATATTTG
TGATATTGTCTATTTCATTCTCACTACCTAATTAGCCTCAGTGTAAGCAG
ACACTGCTCTTATTAATGGAAACAAATGCAACATCCAATAACTATTTGCC
AAATAGTCAGAGAAACTAATATAGAAGGCTAAAATAGTAACACATGTAAT
CACAGAGGAAGAATGCTAACATTACAGCAGAAAATGCCTGGCATATTGTT
TATTATTTCCATTTAAAGAAAATTTCTGTGGCTTTTCTTGTTGTAGNATG
TGGATCCTTTTACAGTCTAAAGATGTCCTAATTATATCTATACAATGAAC
TGCGTATATAATCAGATTTTTATTAGGACAGGAGCTTTCTTTTCCTACCC
AACCCTACCTGGAAGAGAAATTATTGCTGA

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTGGGTAGAGTGCTTGCCTAGCA
GGCAGGAAGCCTGGAGTGGAGACAGGTGAGGCAAAAGAAAGAAAGAAAGA
AAAAGAATAAAAGGAAAGAACATGACTGCTTCAGGGCGTGTGGAGGAAAG
GTTTATGTAGGTAGAGGGGAGAGCATAGCCAGAGACATCTGGGAAACGCC
AGAGCGGACATCACCCTGAGCCATGTGAGGAGAAGCGGGGAGGGGAGAGA
GGAGAATCAGACAGAGACCCTAATAAGGTCTTTGTACAAAGGGGGCGGGT
AACCAAAATGGCTAAATTGTGTAGGGATGAGCTGCTGGGGAAAGGGCAGC
CAGCCCCTGGGCTGGAGAAGTTTAGGGCAGAGCTCAGTGTAAGCAAACCA
GGAGGAACTTAACTAGTAGGGGCTGAGAGATGCTGAGAGAAGCAGGCAGC
CAGGTTCGCTTTGATATGTTAAGTAGGCATTTCAGCCTTTTGTCCCAGGG
TTTGAGACTTAACAGTAGAAGCATCAATGTTCTGAGGGCTGTAAAGTTTC
TTTCCTAGAAAATGGCACCCATCCCAGGGGAGCGGATCCTCCTACAACAT
GGCTTCCGAAAAGCCCCTTTCTGTTCTAGATACAGGGCTGTCTTTCGGTC
ACACCCGCCCTCCCGGGTTTAGGGCCCCTGTTATTTGGTTCTTTTTAAAT
GATTTGCCACA

Query= MSMg01no409_g15.b1 MSMg01no409_g15.b1 CHROMAT_FILE:
MSMg01no409_g15.b1 PHD_FILE: MSMg01no409_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:46 2005
         (531 letters)



>mm_chr4_78231920_78232850
          Length = 931

 Score =  980 bits (507), Expect = 0.0
 Identities = 522/527 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaccttttaaccccatgataaaagcagcctttgtctgtagccagccacatagga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaccttttaaccccatgataaaagcagcctttgtctgtagccagccacatagga 264

                                                                       
Query: 65  agtccatgaatgctcttctacattttgattagaataaacaggacacgagaagtacaaatt 124
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 agtccacgaatgctcttctacattttgattagaataaacaggacatgagaagtacaaatt 324

                                                                       
Query: 125 acttttaagtaccactgagatggttttaacaaagaggttgttacagccattgtaagagga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttttaagtaccactgagatggttttaacaaagaggttgttacagccattgtaagagga 384

                                                                       
Query: 185 tgaaacaatgcacatcttccccgtacttacagggtctaagccagtcaatccaagtgaatc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaaacaatgcacatcttccccgtacttacagggtctaagccagtcaatccaagtgaatc 444

                                                                       
Query: 245 tatctacatgaaaatgacccctggatgttttgtagcaaaacaacacatgatacaagaagc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatctacatgaaaatgacccctggatgttttgtagcaaaacaacacatgatacaagaagc 504

                                                                       
Query: 305 actaaaaattatacatttgaattaatatatatttttcagaatatttgtgatattgtctat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actaaaaattatacatttgaattaatatatatttttcagaatatttgtgatattgtctat 564

                                                                       
Query: 365 ttcattctcactacctaattagcctcagtgtaagcagacactgctcttattaatggaaac 424
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcattctcactacctagttagcctcagtgtaagcagacactgctcttattaatggaaac 624

                                                                       
Query: 425 aaatgcaacatccaataactatttgccaaatagtcagagaaactaatatagaaggctaaa 484
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 625 aaatgcaacatccaataactatttgccaagtagtcagagaaactaatatagaaggctaaa 684

                                                          
Query: 485 atagtaacacatgtaatcacagaggaagaatgctaacattacagcag 531
           ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 685 atagtaacacatgtaatcacaaaggaagaatgctaacattacagcag 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)