Query= MSMg01no409_l21.b1 MSMg01no409_l21.b1 CHROMAT_FILE:
MSMg01no409_l21.b1 PHD_FILE: MSMg01no409_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:13 2005
(462 letters)
>mm_chr4_33835718_33836579
Length = 862
Score = 857 bits (443), Expect = 0.0
Identities = 455/459 (99%)
Strand = Plus / Minus
Query: 4 ggaattctttatccagggaccttatgaacatccaaattgttgttacatctgaaggggaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggaattctttatccagggaccttatgaacatccaaattgttgttacatctgaaggggaat 603
Query: 64 tgacagggcagctaaggaaagtggcaattcaaagcttttgtctgttatgtagccaaactc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgacagggcagctaaggaaagtggcaattcaaagcttttgtctgttatgtagccaaactc 543
Query: 124 tgacaagagggcttcccaaggacaagtgtaaagaagagagccctctgtaacaatgagaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgacaagagggcttcccaaggacaagtgtaaagaagagagccctctgtaacaatgagaga 483
Query: 184 aatagaactttttaggcaacgttcagactttcagggacaccacttactagttcacagcaa 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aatagaactttttaggcaatgttcagactttcagggacaccacttactagttcacagcaa 423
Query: 244 ccttcgttttcatttttctatgttatgactcaggaatgcagtgttacaaacagtgctggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ccttcgttttcatttttctatgttatgactcaggaatgcagtgttacaaacagtgctggg 363
Query: 304 aatgcagcttcttgaaagtgcttagtgtgtctgcagccctgggttcactcccagccctga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 362 aatgcagcttcttgaaagtgcttagtgtgtctgcagccctgggttcactcccagcactga 303
Query: 364 aaacaacagcaccaaaggaaatgatttaaagcagaaccttgccttattcatttgactaac 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caacaacagcaccaaaggaaatgatttaaagcagaaccttgccttattcatttgactaac 243
Query: 424 tcttgctcaaagtgggctctaaacgatgcaaagtgctaa 462
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 242 tcttgctcaaagtgggttctaaacgatgcaaagtgctaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_l21.g1 MSMg01no409_l21.g1 CHROMAT_FILE:
MSMg01no409_l21.g1 PHD_FILE: MSMg01no409_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:13 2005
(428 letters)
>mm_chr4_33709337_33710168
Length = 832
Score = 777 bits (402), Expect = 0.0
Identities = 423/432 (97%), Gaps = 4/432 (0%)
Strand = Plus / Plus
Query: 1 tcggggtacacaatttggaatggaaaccgggaggcaaggggatgaaatgggacaaatgtg 60
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 201 tcggggtacacaatttggaatggaagccgggaggcaagggggtgaaatgggacaaatgtg 260
Query: 61 tggagagaggctgtacgcttacctcggtacacag----tctccaggcacatggagatata 116
|||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 261 tggagagagggtgtacgcttaccttggtacacagacagtctccaggcacatggagatata 320
Query: 117 aggccgggtgacgtgatcaaagcacaactgtgctaaaacagcaatggaacattaactcct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggccgggtgacgtgatcaaagcacaactgtgctaaaacagcaatggaacattaactcct 380
Query: 177 tggctactaatataattcaggacaaagggatttattaaaagaatctataacactttaatg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggctactaatataattcaggacaaagggatttattaaaagaatctataacactttaatg 440
Query: 237 agaaccattaagggagccacaccatactatttatctggaagactaaaaatagtggggaag 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaccattaagggagccacaccatactatttatctggaagactaaaaatagtggggaag 500
Query: 297 actccccagatgagtgtatcaatttactgcaatgcctattaagatcacagcaagatactt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actccccagatgagtgtatcaatttactgcaatgcctattaagatcacagcaagatactt 560
Query: 357 tatggaaatttagaatagtgaaactcatttggaaataatctgtggccaaggagtcatgta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatggaaatttagaatagtgaaactcatttggaaataatctgtggccaaggagtcatgta 620
Query: 417 tggatcgatata 428
|||||||||||
Sbjct: 621 cggatcgatata 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 832
Length adjustment: 9
Effective length of query: 419
Effective length of database: 823
Effective search space: 344837
Effective search space used: 344837
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
