CGCTATACGACTCCTATAGTCAGAGGATCCGCGGAATTCTTGGTCTTGAG
AGCAGTTCAGTTGCAACGGGTGAGCACCTGCTTCCAGGATGTGTCTAGAG
ACCTAGAGGAAAATGGGTGCTTCACCTTCAGGCTGGAGTCCAAAAGAGAA
AGTGTGTAGGGAGAGAAAGGAAGAGAAGAGGGAAGGAAGAGTATTACAAA
GACTTGCTGAATCCACTGGGGAAATAAAATTTGGAAAGAAAAATTTAAAA
TTATAATAAGTATCTTAGCCCTGGCAAGTCATGAAGATGACCTAGTACAG
ATTTGGGGACTTTGAGGTCAAGGACAAAATTGCTCCCTATAGGTTATTCC
AATAATTTTATCCTGAAAACTCATACAAATTGTGTATCTTACTCTGGAAT
ATAGACTTGAGCCATTTGCTTCTTCATTGCTACTTTCAGGGCTGTGCCCT
GTTTTGCTTCTCAGCTGCCCCCTAGCCCTCCATCTTGCTGATGAGTCCAT
GGGATACTGCAGGGTAGGATTCTAGAGCTGTGAAATCCGCCCACTGTAAA
CAATGGCTCAAGTGGGCAGGAAGAGTGATTCATACCAGCATTCGGCAGTG
CCTGCCAATTATTAGTCATGGAGCTCCCAAGGATGCAGAGATGAGTTGGG
CCAGGCAGGCTTCAGCTCCAAGCAGCTCACAGTGCAATGTGAGAGGCAGG
CCTATTACTGGGGGATCATGCTATAACAGGCCTGCTATGGTGGGAATGCT
AGCTTCCACATG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCACCTGAGGAATACTGAATTTCTGAGAAGCACCTGAAAAA
ATGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAAGTGAC
AGCAGATGCTGGCGAGAATGTGTAGAAAGAGGAACACTCCTCCACAGTTG
GTGGGAATGCAAGCTTGTACAACCACTCTGGAAGTCAGTCTGGAGGTTCC
TCAGAAAATTGGACATAATACTACCGGAAGATCCAGCAATATCTCTCCTG
GGCATATACCCAGAAGAAGTTCCAACTGGTAATAAGAACACCTGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTAGAAAGAACCCA
GATGTCCCTCAACAGAGGAATAGCTACAGAAAATGTGGTACAATTACACA
ATGGAGTACTACTCAGCAATTAAAAACAATGGATTTATGAAATTCTTGGA
CACATGGAGGTACCTGGAGATATCATCCTTAGTGAGGAACCCCATCCCAA
AGAAAGCTTTAATTGGGCTCCCTGATAATGGATATTACCCCAGAAACAAG
AACACCCAGAAACATTTGCTAACCCATAAAACCCCAAAAGGAGACCCTTG
GGAATCTTCTTTCCCCTTCAAAAGGAAAAAAATTCTTGAGGGTTTAGAAA
CACTT

Query= MSMg01no413_a22.b1 MSMg01no413_a22.b1 CHROMAT_FILE:
MSMg01no413_a22.b1 PHD_FILE: MSMg01no413_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:37 2005
         (614 letters)



>mm_chr4_111270073_111271086
          Length = 1014

 Score = 1152 bits (596), Expect = 0.0
 Identities = 602/604 (99%)
 Strand = Plus / Plus

                                                                       
Query: 11  gaattcttggtcttgagagcagttcagttgcaacgggtgagcacctgcttccaggatgtg 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaattcttggtcttgagagcagttcagttgcaacgggtgagcacctgcttccaggatgtg 270

                                                                       
Query: 71  tctagagacctagaggaaaatgggtgcttcaccttcaggctggagtccaaaagagaaagt 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tctagagacctagaggaaaatgggtgcttcaccttcaggctggagtccaaaagagaaagt 330

                                                                       
Query: 131 gtgtagggagagaaaggaagagaagagggaaggaagagtattacaaagacttgctgaatc 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtgtagggagagaaaggaagagaagagggaaggaagagtattacaaagacttgctgaatc 390

                                                                       
Query: 191 cactggggaaataaaatttggaaagaaaaatttaaaattataataagtatcttagccctg 250
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cactagggaaataaaatttggaaagaaaaatttaaaattataataagtatcttagccctg 450

                                                                       
Query: 251 gcaagtcatgaagatgacctagtacagatttggggactttgaggtcaaggacaaaattgc 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcaagtcatgaagatgacctagtacagatttggggactttgaggtcaaggacaaaattgc 510

                                                                       
Query: 311 tccctataggttattccaataattttatcctgaaaactcatacaaattgtgtatcttact 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tccctataggttattccaataattttatcctgaaaactcatacaaattgtgtatcttact 570

                                                                       
Query: 371 ctggaatatagacttgagccatttgcttcttcattgctactttcagggctgtgccctgtt 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctggaatatagacttgagccatttgcttcttcattgctactttcagggctgtgccctgtt 630

                                                                       
Query: 431 ttgcttctcagctgccccctagccctccatcttgctgatgagtccatgggatactgcagg 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttgcttctcagctgccccctagccctccatcttgctgatgagtccatgggatactgcagg 690

                                                                       
Query: 491 gtaggattctagagctgtgaaatccgcccactgtaaacaatggctcaagtgggcaggaag 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gtaggattctagagctgtgaaatccgcccactgtaaacaatggctcaagtgggcaggaag 750

                                                                       
Query: 551 agtgattcataccagcattcggcagtgcctgccaattattagtcatggagctcccaagga 610
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 751 agtgattcataccagcattcagcagtgcctgccaattattagtcatggagctcccaagga 810

               
Query: 611 tgca 614
           ||||
Sbjct: 811 tgca 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)