XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTG
AGAACTGATTCACAGGAAAACTTCCAGAATTGAGGCATCAAGCACCAGTG
CATGTGGACTAGGGACTTATTTCCAGGATTGATACCTCAACAGCCAGGCA
CATTCAAGATGAACAAATAGCAATATGGATTCCTCATACCCTCAACACTC
CAAGATGTCCTATAAGGAAAAGCTTTGTAATTAACTAGAACTGTAATTGA
TTTAGACAAGGGAATACATCTAGGGCACATTGGGGTCTGTGTTTGTTCTG
CAGTGCAGATCTGCTGGGATGAAATACAATGTCCCTGAAAAGGAAAGCTA
CTACAGTGGGAAAGCACTCAGTTATAATGGTACTTGTTGGCAGTACCCAG
GTTAGTAGCCTAGGCAGGGCCATTCAAATTTCAATGCTGTCTTCAGGTTG
ATGCTCTCATTTCCATCCTAGTTTTCCTGTTCTTAATAAGTGGGAGTAGG
TAGCATTTATCATAATTTCTCTTTCTGTGTGATGGTGAAGACATGTGATG
ATGACCAGTCTTAACCATGGGAGTAGGGCTGAGATGAGACTTTGGGGTGG
ATGGTTCTATATTCTGGTACTTTGGATAGGACAGAGTANGAATGAAAAAA
AAAAAGGAGCAGAGATCTACGGTGGGGCTTAAAACTGGTTTCTTGGCCAC
TCTGGTCTAGCCTGGCCCTTTTCGGCGAATTCCTGGAAAT

TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCTTGGTCACCTTTAGTTATCTTATTGTTCTAGC
TAGAACTTCAAGTGCTATATGAATTGATATGGAGAAAGTGGAAACTCTTG
TCTCGTGCCTGATATTAGTGAAATCGATTTAAGTTTCTCTCCATTTAATT
TGATGTGGCTATGTGCGTTGTTGTACACTGTTTAGCTGCTTTATTGTCTT
TAGGAATGTCACTTTTATCTCTAATAGCTCCTATACTTTTATCATAAAAG
AGTATTGAATTGTGACAAAGGGTTTTCAATATCTAAGGAGATGAACATAT
TTTTTTCTTTCAGTTTGTCTATATGGTGGGTTGCATTGATTTTTATATAT
TGAAACATCCATGCATCCCTGAGATGAAAGCTGCTCGATCATGNNTGGAT
AATATTTTCAATCCGGTCCCTGGATTCCTTTTTCTGAATACTCCATTAAA
TATTTTTGCAGAAAGGGTCCTTAGGGAAATTTACCCTTTGTATTCCCTAA
ACCTGAAAATAAAGGGGGGCCCCCCCATGGCCAAACTTGGAACCCAAAGG
GTTTTTTAAAAAAATTTTTCTTTAAGGGATTTTTAAAAATTAATTTTCCT
CTCCCCCTTTTGGGGCCAAAAAAACCCTTACCCCTTTGTTTTCCCCCCGG
GGGAAAAAAAAATATTTTTTAGGGGGGGGGTTTCCCCCACAGGGGGGGAA
AACCCTCCCTAAGAAAAAAGGTCC

Query= MSMg01no422_l10.b1 MSMg01no422_l10.b1 CHROMAT_FILE:
MSMg01no422_l10.b1 PHD_FILE: MSMg01no422_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:13 2005
         (545 letters)



>mm_chr4_22777269_22778210
          Length = 942

 Score =  967 bits (500), Expect = 0.0
 Identities = 533/552 (96%), Gaps = 14/552 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctgagaactgattcacaggaaaacttccagaattgaggcatcaagcaccagtgc 64
           |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 194 gaattcctgagaacagattcacaggaaaacttctagaattgaggcatcaagcagcagtgc 253

                                                                       
Query: 65  atgtggactagggacttatttccaggattgatacctcaacagccaggcacattcaagatg 124
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 254 atgtggactagggacttatttccaggcttgatacctcaacagccaggcacattcaagatg 313

                                                                       
Query: 125 aacaaatagcaatatggattcctcataccctcaacactccaagatgtcctataaggaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aacaaatagcaatatggattcctcataccctcaacactccaagatgtcctataaggaaaa 373

                                                                       
Query: 185 gctttgtaattaactagaactgtaattgatttagacaagggaatacatctagggcacatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gctttgtaattaactagaactgtaattgatttagacaagggaatacatctagggcacatt 433

                                                                       
Query: 245 ggggtctgtgtttgttctgcagtgcagatctgctgggatgaaatacaatgtccctgaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggggtctgtgtttgttctgcagtgcagatctgctgggatgaaatacaatgtccctgaaaa 493

                                                                       
Query: 305 ggaaagctactacagtgggaaagcactcagttataatggtacttgttggcagtacccagg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggaaagctactacagtgggaaagcactcagttataatggtacttgttggcagtacccagg 553

                                                                       
Query: 365 ttagtagcctaggcagggccattcaaatttcaatgctgtcttcaggttgatgctctcatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttagtagcctaggcagggccattcaaatttcaatgctgtcttcaggttgatgctctcatt 613

                                                                       
Query: 425 tccatcctagttt-----------tcctgttcttaataagtgggagtaggtagcatttat 473
           |||||||||||||           |||||||||||||||||| |||||||||||||||||
Sbjct: 614 tccatcctagtttcttctttgttttcctgttcttaataagtgagagtaggtagcatttat 673

                                                                       
Query: 474 cataatttctctttctgtgtgatggtgaagacatgtgatgatgaccagtcttaaccatgg 533
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 674 cataatttctctttctgtgtgatggtgaagacatgtgatga---ccagtcttaaccatgg 730

                       
Query: 534 gagtagggctga 545
           ||||||||||||
Sbjct: 731 gagtagggctga 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 942
Length adjustment: 10
Effective length of query: 535
Effective length of database: 932
Effective search space:   498620
Effective search space used:   498620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)