XXXXXXXXXXXXXXXXXXXXXXTTCGAGAGAATCCGCGGAATTCAGGAGA
CTGTACACAACTCTGGGTGGACAAGCAACCAATCATTTTGAAGATATTTT
AATTTCATTAAGGAGTCTGTGTTCTGAAATGGCCTTGAACTTCCTAGACA
GTCAACCAATGTGAATATTAAACTCGTGATTTTTTTTTTTTGCCTCAACT
TCATGAGGATTTAGGGTTACATGTCTGTGCCATCAGACTCAGCAAGTCCC
CTACTCTCTTTTAGAGGAGGAAAAGACTATAGTCTCAGATATGCAATTAT
TAAAACAAGTTATCTTTAAATCATTATGGTTAAATATTGAGCTTAATGCA
TTATAATAAATTCTTGAATGTCTGTACATTTTAAGGAAAATAATTGTTTT
CTTTGTTGACATTCGTATCTTGCATCACTGCTCATGTGTTACCTACCCTC
ACCCAAAACTTGTGTACATTTAGGAAGCAAAGTACCTAACAATATTAAAC
TGGTACTCCAAAACCATTAACAGATTCTAAAATCTTAGCCCTATAATATT
GTCTTTTAATAAAATTTAAGAAGAACAAGGTAAAAAGGAGAATATGGAGG
AGGAGGAGGAGGAAATATATGAAAATCTCATGGTTAAAAACCACTTCTTT
CAGAAAAGAAATTTTTGGGCACACATTTAACTGTAGCAGGAAACAGTTAT
CTATATATAGAAAAATGTTTCTGAGAAGG

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCTCTCTCTCTTCCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCCCACCTTT
GAATCCTGCCTCAGCTTATTGGCCATTAGATTTTTTTATTGAAATGTGAT
GCTTCCAGATATTATCCCTACATCTCTCCCCGTTTAGTCCAATAAAATAG
TCTTCTATCATCAATAAACTATGCATAATAAGGATTATGAAAACAATACA
GTAAGAATTAAATTCTCAATATCCAGTCCGTTTGTATTTGGCAAACTTGG
AGAAAGAACTCTATTATCTATTTTATTTTGTTGAGTCCAATGTTCTATAT
CTAAATCACTTTGTATCATAACTTGCATTTATCAACCTAAGAATATCTCA
TTAGACCTCATATTATTATATTAAATGGTAAATAACCTAAGTTTAATTGT
GAGACATTAACTACCTAGTCTTCAACCCCATCAGAAACCTGAGAAACAAC
AAAAATCATATGAAAAAATGGGAAGTGCATAGCATGCTTCTTTCCAAAAC
GATGGAGAAAAAAAAAGGTTGCTGGCTACCTGGGAACCTTAATTCAAAAT
CCCTGTCCCATGGTTGAAGCTATCATCTTTTTGGTTTTTGACCCCGCATA
TCTTGTCATACCTTTTTTGTAAAGTGGGAAATATCCTAGTATAACTTG

Query= MSMg01no422_n07.b1 MSMg01no422_n07.b1 CHROMAT_FILE:
MSMg01no422_n07.b1 PHD_FILE: MSMg01no422_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:22 2005
         (509 letters)



>mm_chr4_26213682_26214590
          Length = 909

 Score =  899 bits (465), Expect = 0.0
 Identities = 498/509 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactctgggtggacaagcaaccaatcattttgaagatattttaatttcattaaggagtct 60
           ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 201 aactctgggtggacaagcaaccaatcattttcaagatattttaatttaattaaggagtct 260

                                                                       
Query: 61  gtgttctgaaatggccttgaacttcctagacagtcaaccaatgtgaatattaaactcgtg 120
           || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttctgaaatggccttgaacttcttagacagtcaaccaatgtgaatattaaactcgtg 320

                                                                       
Query: 121 attttttttttttgcctcaacttcatgaggatttagggttacatgtctgtgccatcagac 180
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 321 attttttttttttgcctcaacttcatgaggatttaggattacatgtctgtgccaacagac 380

                                                                       
Query: 181 tcagcaagtcccctactctcttttagaggaggaaaagactatagtctcagatatgcaatt 240
           |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 tcagcaagtctcctactctcttttagaggaggaaaagactatggtctcagatatgcaatt 440

                                                                       
Query: 241 attaaaacaagttatctttaaatcattatggttaaatattgagcttaatgcattataata 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 attaaaacaagttatctttaaatcattatggttaaatattgagcttaatgcattataaca 500

                                                                       
Query: 301 aattcttgaatgtctgtacattttaaggaaaataattgttttctttgttgacattcgtat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattcttgaatgtctgtacattttaaggaaaataattgttttctttgttgacattcgtat 560

                                                                       
Query: 361 cttgcatcactgctcatgtgttacctaccctcacccaaaacttgtgtacatttaggaagc 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 cttgcatcactgctcatgtgttacctaccctcacccaaaacttgtgtacatttaggaaac 620

                                                                       
Query: 421 aaagtacctaacaatattaaactggtactccaaaaccattaacagattctaaaatcttag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagtacctaacaatattaaactggtactccaaaaccattaacagattctaaaatcttag 680

                                        
Query: 481 ccctataatattgtcttttaataaaattt 509
           |||||||||| ||||||||||||||||||
Sbjct: 681 ccctataatactgtcttttaataaaattt 709


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)