Query= MSMg01no426_d13.b1 MSMg01no426_d13.b1 CHROMAT_FILE:
MSMg01no426_d13.b1 PHD_FILE: MSMg01no426_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:41 2005
(242 letters)
>mm_chr4_53815321_53815962
Length = 642
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%)
Strand = Plus / Minus
Query: 1 gtgtgtgatcctaaccactgggacatctctccagctccataaaacattagatctttaaat 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 442 gtgtgtgatcctaaccactgggacatctctctagctccataaaacattagatctttaaat 383
Query: 61 ctaggcttgtaaaatcctctattacttctgctctcaggcaaaagccatccatttcccaga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctaggcttgtaaagtcctctattacttctgctctcaggcaaaagccatccatttcccaga 323
Query: 121 gttgtgtctgtaataactgatttgaatctggtcatggtggctagcttgaccacgtcccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 322 gttgtgtctgtaataactgatttgaatctggtcatggtggctagcttgaccacatcccaa 263
Query: 181 gactgcagctcacatctgctacccttagccctttatttatgatgagacttagacaaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 262 gactgcagctcacatctgctacccttagccctttatttatgatgagacttagacaaacag 203
Query: 241 at 242
||
Sbjct: 202 at 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_d13.g1 MSMg01no426_d13.g1 CHROMAT_FILE:
MSMg01no426_d13.g1 PHD_FILE: MSMg01no426_d13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:41 2005
(171 letters)
>mm_chr4_53635649_53636219
Length = 571
Score = 304 bits (157), Expect = 2e-87
Identities = 166/169 (98%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 1 agaaacaaagacaatctgatctctagtcatttctcttcccatctccctttgtttctaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaacaaagacaatctgatctctagtcatttctcttcccatctccctttgtttctaaac 260
Query: 61 cttgaggaagctgtgctaaatttgaatatatatttcaaagctaacttaagtagttctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgaggaagctgtgctaaatttgaatatatatttcaaagctaacttaagtagttctgac 320
Query: 121 tcacatctaggagcagagggagcaggtgggaaggg-atggggtttatcg 168
||||||||||||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 321 tcacatctaggagcagagggagcaggtgg-aaggggatgggggttatcg 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
