Query= MSMg01no427_g18.b1 MSMg01no427_g18.b1 CHROMAT_FILE:
MSMg01no427_g18.b1 PHD_FILE: MSMg01no427_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:17 2005
(577 letters)
>mm_chr4_75799692_75800668
Length = 977
Score = 1100 bits (569), Expect = 0.0
Identities = 572/573 (99%)
Strand = Plus / Plus
Query: 5 gaattcaggagactgtctcgggatatactagaaaaatacttcttataaaataaccctgtt 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggagacagtctcgggatatactagaaaaatacttcttataaaataaccctgtt 264
Query: 65 acagctaatcatatattagagaaagacacgattaaagccctatattgattttctatgcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acagctaatcatatattagagaaagacacgattaaagccctatattgattttctatgcag 324
Query: 125 gtatctactaaattataacacaaaaatgcagtcttgatgctctttttttctacttaaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatctactaaattataacacaaaaatgcagtcttgatgctctttttttctacttaaaac 384
Query: 185 aagtattaaccacatggatatgggcccatcttcaccctcagaaatcagcattagtggctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtattaaccacatggatatgggcccatcttcaccctcagaaatcagcattagtggctg 444
Query: 245 ctgtattaagccatgtgtgttcttaaatactctgccttggtggagaaaagaatgttttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgtattaagccatgtgtgttcttaaatactctgccttggtggagaaaagaatgttttat 504
Query: 305 cctcacacatgtgagttcagaacacccactaaggacttgccaggaaattctgggtatctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctcacacatgtgagttcagaacacccactaaggacttgccaggaaattctgggtatctg 564
Query: 365 tccaaaatgccttagaggtaaccacacatttgcatacagctttatcaatctagtaattca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccaaaatgccttagaggtaaccacacatttgcatacagctttatcaatctagtaattca 624
Query: 425 atctctgtattctgaagacaactgaatgagccaggaaagtttctttgcagccgagaaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atctctgtattctgaagacaactgaatgagccaggaaagtttctttgcagccgagaaaaa 684
Query: 485 aaattcatgaagtattagagcatgacagtcaatggcctcttgtataaaaaggagaatggc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaattcatgaagtattagagcatgacagtcaatggcctcttgtataaaaaggagaatggc 744
Query: 545 ttgagttgtactcctataaagacacagcattaa 577
|||||||||||||||||||||||||||||||||
Sbjct: 745 ttgagttgtactcctataaagacacagcattaa 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_g18.g1 MSMg01no427_g18.g1 CHROMAT_FILE:
MSMg01no427_g18.g1 PHD_FILE: MSMg01no427_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:18 2005
(548 letters)
>mm_chr4_75954941_75955888
Length = 948
Score = 833 bits (431), Expect = 0.0
Identities = 460/473 (97%), Gaps = 6/473 (1%)
Strand = Plus / Minus
Query: 82 agcaggctgagaaaaacagtaagtgtcattactccatggctttcagttcctaagttttaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 agcaggctgagaaaaacagtaagtgtcattactccatggctttcagttcctaagttttaa 889
Query: 142 ------gtcctacatgagttcctgtcttgacctctctggatgatggactatacattgtaa 195
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 888 gtttctgtcctacatgagttcctgtcttgacttctctggatgatggactatacattgtaa 829
Query: 196 ggaaaaataaaccctttcttcccaacattgcttttatccatggtgtttcattatgacaat 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ggaaaaataaaccctttcttcccaacattgcttttatccatggtgtttcattatgacaat 769
Query: 256 agaaaccctaactatgacaaaggtccatagatattttcttattttattaaaaaaatctgg 315
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 768 agaaaccctaactatgacataggtccatagatattttcttattttattaaaaaaatatgg 709
Query: 316 tatggttaacaaaacaaaagcaacaaaatttagctttgaaatggaaaggtatgagctatt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tatggttaacaaaacaaaagcaacaaaatttagctttgaaatggaaaggtatgagctatt 649
Query: 376 ttttttaaattacagttgggaggtcttagatatcctattcctttattcaactggtctgtg 435
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tttttaaaattacagttgggaggtcttagatatcctattcctttattcaactggtctgtg 589
Query: 436 ttctgcaccgtgtgtgcttctcattggctgatagagattttgatagtgaaggaggtgata 495
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 588 ttctgcaccgtgtgagcttctcattggctgatagagattttgatagtgaaggagatgata 529
Query: 496 gttttctggcttgtcccatctacctctagtctaactggcagttgctcatctgc 548
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtttcctggcttgtcccatctacctctagtctaactggcagttgctcatctgc 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
