Query= MSMg01no429_i16.b1 MSMg01no429_i16.b1 CHROMAT_FILE:
MSMg01no429_i16.b1 PHD_FILE: MSMg01no429_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
(346 letters)
>mm_chr4_147540921_147541669
Length = 749
Score = 625 bits (323), Expect = 0.0
Identities = 339/349 (97%), Gaps = 9/349 (2%)
Strand = Plus / Minus
Query: 1 gcgatctgatgctttttcttttatgggcaccagaacgggtcacacacacacacacacaca 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 646 gcgatctgatgctttttcttttatgggcaccagaacgggt------cacacacacacaca 593
Query: 61 cacacacacacacacacacacacacacacacacacacacacacgtagtcccggaagaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cacacacacacacacacacacacacacacacacacacacacacgtagtcccggaagaccc 533
Query: 121 aagacagagacttagaagcaattagacagaagggtcaaggcactaaggcaagtcccagct 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 532 aagacagagacttagaagcaattagacagaagggtcaaggaactaaggcaagtcccagct 473
Query: 181 caggcggctgtcccacctcaccagcaggtggcaccaaaccacagactaaaagatgaaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 caggcggctgtcccacctcaccagcaggtggcaccaaaccacagactaaaagatgaaggc 413
Query: 241 agagctgggggt---gggggggggtcacagtggctctattaggacaacagtgacaagacc 297
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agagctgggggtggggggggggggtcacagtggctctattaggacaacagtgacaagacc 353
Query: 298 tctcctcacccccagtcagccatggagcattctgggaaggagctgagat 346
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tctcctcacccccagtcagccatggagcattctgggaaggagctgagat 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 749
Length adjustment: 9
Effective length of query: 337
Effective length of database: 740
Effective search space: 249380
Effective search space used: 249380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_i16.g1 MSMg01no429_i16.g1 CHROMAT_FILE:
MSMg01no429_i16.g1 PHD_FILE: MSMg01no429_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
(244 letters)
>mm_chr4_147339849_147340492
Length = 644
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 caggaacgtgttacagctgctgacagcacttcactctctgcctgtgacctgtccatgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaacgtgttacagctgctgacagcacttcactctctgcctgtgacctgtccatgtga 260
Query: 61 cttcctccagaactatgtgaagaggagcgttgagggtgggcagcagcaccctgactaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcctccagaactatgtgaagaggagcgttgagggtgggcagcagcaccctgactaaat 320
Query: 121 atccaaagactcctggactccagctgtactcctgagaagcaacaccatacggggctggtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atccaaagactcctggactccagctgtactcctgagaagcaacaccatacggggctgggg 380
Query: 181 gtggacccacagtggtcacagctggctgtcagtaaccaagccccttaggcttccagggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggacccacagtggtcacagctggctgtcagtaaccaagccccttaggcttccagggac 440
Query: 241 ca 242
||
Sbjct: 441 ca 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
