Query= MSMg01no429_i18.b1 MSMg01no429_i18.b1 CHROMAT_FILE:
MSMg01no429_i18.b1 PHD_FILE: MSMg01no429_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
(556 letters)
>mm_chr4_71892931_71893888
Length = 958
Score = 1025 bits (530), Expect = 0.0
Identities = 548/554 (98%), Gaps = 2/554 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggag-actcttactttttc-aagccattctgctccgtggaccttgatttctt 62
|||||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctttgagcactcttactttttcaaagccattctgctccatggaccttgatttctt 264
Query: 63 ttttacctttggtgctgagaataccaacccctgggctttgcatgtgcttagacatgcatt 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 ttttacctttggtgctgagaataccaacccctgggctttgcatgtgcttagacatgcact 324
Query: 123 ccagaacaccatggtttctctacactcttaaaacacttggcagcaacttttgcttatctc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccagaacaccatggtttctctacactcttaaaacacttggcagcaacttttgcttatctc 384
Query: 183 tactgccatggagctctggaagtgttgagtcagtgagtttcctcatttttaactttagaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactgccatggagctctggaagtgttgagtcagtgagtttcctcatttttaactttagaa 444
Query: 243 taaaattgtttcatcactataaatgtatctaaaccacagacaactgtgtcagcacatgac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taaaattgtttcatcactataaatgtatctaaaccacagacaactgtgtcagcacatgac 504
Query: 303 atcaattccagctccagcagtggtattgttgaaatagttccagtcttatcagcttcatct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcaattccagctccagcagtggtattgttgaaatagttccagtcttatcagcttcatct 564
Query: 363 cagttgctggaagttccttgtaaagatcgtatgagaaagttactgttcacacaggcctac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagttgctggaagttccttgtaaagatcgtatgagaaagttactgttcacacaggcctac 624
Query: 423 cagcagtcgtaactgttgagtctaccatttctccatagcgtaataaccaccaattgctga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagcagtcgtaactgttgagtctaccatttctccatagcgtaataaccaccaattgctga 684
Query: 483 ataccactttgaaagttagggcaacaaatcttaggatgcagacacaattagaaacttaaa 542
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 685 ataccactttgaaagttagggcaacaaatcttaggatgcaaacacaattagaaacttaaa 744
Query: 543 ttcacagactcacg 556
||||||||||||||
Sbjct: 745 ttcacagactcacg 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 958
Length adjustment: 10
Effective length of query: 546
Effective length of database: 948
Effective search space: 517608
Effective search space used: 517608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_i18.g1 MSMg01no429_i18.g1 CHROMAT_FILE:
MSMg01no429_i18.g1 PHD_FILE: MSMg01no429_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
(246 letters)
>mm_chr4_72045631_72046276
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Minus
Query: 1 catcgcgcaacacagcctctttgtatcttcaaaatggtgtgactggccctaggccagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 446 catcgcgcaacacagcctctttgtatcttcaaaatggtgtgactggccccaggccagcca 387
Query: 61 cgttcaaagtttcgctatttgtgtcatctgggccccagtactgatggaggctttgattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cgttcaaagtttcgctatttgtgtcatctgggccccagtactgatggaggctttgattac 327
Query: 121 agcttggacctagctgtaagacccttcaggggcagccactcagcaaataaaggcattgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agcttggacctagctgtaagacccttcaggggcagccactcagcaaataaaggcattgat 267
Query: 181 tggttgttgtgtcaatttagccataagggtgcagggcatggttcttttgaaaagcctaat 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tggttgttgggtcaatttagccataagggtgcagggcatggttcttttgaaaagcctaat 207
Query: 241 ggatta 246
||||||
Sbjct: 206 ggatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
