XXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCTTTG
TTCTGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTC
CACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATT
TAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTA
TTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCA
TTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGA
ATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCT
ATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGA
TTTGACCTTAGTACAGGAGATAGTATGGATCGATTTCCTTCTTCTACCGA
TAACCACCAGTTGGCCAGCACCATTGTTGAAATGTTGTCTTTCTTCCCTG
GATGGGTTTAGCCCCCTGGCCAAAATCAGGGACCCTAGGGGGGGGGGTCC
TTTTCCGGGCCTTCCCTTTCCATTCCCTTTGGGTCTCTTGGCCGGCCTCC
ATACCCCAGACCCGTGGTGTTTTTTATCCCAAATTGTCTCCTGGTTAAAA
ATTTTTCATGCCCGGGGTTGGGGTGATTCCCTCCCAAAAAATTTTTCTTT
CTTTTCTCTGGAGAAAA

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCCAAGTGGCTCAGTAATGATTATGGAATAG
AATGAAAGTGTATGTGATAAATGTTCATGTAGGATGTTAGATTCACATAA
AAGTGAATCATGAGAAAGTCTTTACCTCAATCCATAGTGTTTCCATTAGC
AAATATAAACAACTAAACAAATAACACTATCACACACATACACACACACA
CACACACAAAACTAACAAAAATCTAGTCTAATTTCCTTTACATTCTAAAC
AGATTTTATATATGTGCTCTATAAACAGGCCACAACTTTTAAAGTGAAGA
AATAAAATTCAAATAGGCTAATCTTGTACCCTATCCAGAGCTAAATTTCT
CTGGAAAATGTATATTTAAGTAGAACAGGGTGTTATAAAGATGTCTTTTT
TAGCACTAGGTCAAAATTTTTGTGTGACTAATTAGAAGAAGCAAAGGTAA
GTTAATCATTTGAACTACCTTTTCCGCAATAAATAAAAACAAGAAAATGA
TTTATGAACATAAGTGGTCTACTGTATAAAACAGGATAAAGCCACCTTTG
TCCCCAGGTGAGAAATATTCACTTGGAATGCCTTTTTTTTAAATATTTTT
ATTAGGAATTAGCTCATTTATATTTTCCAAGTTATATTAAAAAGCCCCCC
TAACATTCCCCCTTAACCCCCATTTAACCATTTCCCCCTTTTGTGTTG

Query= MSMg01no429_j24.g1 MSMg01no429_j24.g1 CHROMAT_FILE:
MSMg01no429_j24.g1 PHD_FILE: MSMg01no429_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:10 2005
         (435 letters)



>mm_chr4_18455127_18455961
          Length = 835

 Score =  818 bits (423), Expect = 0.0
 Identities = 432/435 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaagtggctcagtaatgattatggaatagaatgaaagtgtatgtgataaatgttcatgt 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ccaagtggctcagtaatgattatggaatagaatgaaattgtatgtgataaatgttcatgt 260

                                                                       
Query: 61  aggatgttagattcacataaaagtgaatcatgagaaagtctttacctcaatccatagtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggatgttagattcacataaaagtgaatcatgagaaagtctttacctcaatccatagtgt 320

                                                                       
Query: 121 ttccattagcaaatataaacaactaaacaaataacactatcacacacatacacacacaca 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ttccattagcaaatataaacaactaaacaaataacactatcacacacacacacacacaca 380

                                                                       
Query: 181 cacacacaaaactaacaaaaatctagtctaatttcctttacattctaaacagattttata 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacacacaactaacaaaaatctagtctaatttcctttacattctaaacagattttata 440

                                                                       
Query: 241 tatgtgctctataaacaggccacaacttttaaagtgaagaaataaaattcaaataggcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgtgctctataaacaggccacaacttttaaagtgaagaaataaaattcaaataggcta 500

                                                                       
Query: 301 atcttgtaccctatccagagctaaatttctctggaaaatgtatatttaagtagaacaggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcttgtaccctatccagagctaaatttctctggaaaatgtatatttaagtagaacaggg 560

                                                                       
Query: 361 tgttataaagatgtcttttttagcactaggtcaaaatttttgtgtgactaattagaagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttataaagatgtcttttttagcactaggtcaaaatttttgtgtgactaattagaagaa 620

                          
Query: 421 gcaaaggtaagttaa 435
           |||||||||||||||
Sbjct: 621 gcaaaggtaagttaa 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space:   351876
Effective search space used:   351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)