Query= MSMg01no430_f10.b1 MSMg01no430_f10.b1 CHROMAT_FILE:
MSMg01no430_f10.b1 PHD_FILE: MSMg01no430_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:08 2005
(210 letters)
>mm_chr4_20412238_20412847
Length = 610
Score = 393 bits (203), Expect = e-114
Identities = 203/203 (100%)
Strand = Plus / Minus
Query: 5 gaattcagaatattcatgttactttataagattttctgagtaaaactgaattaaacagtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaattcagaatattcatgttactttataagattttctgagtaaaactgaattaaacagtt 325
Query: 65 tgctgaataggtcctagcaatggagactgatggtgaatcccaatgttaagagtccttgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgctgaataggtcctagcaatggagactgatggtgaatcccaatgttaagagtccttgtt 265
Query: 125 taacatacaggaccatctcagcttgatcatcagcaccacaggaaaaagaaaaaggaagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taacatacaggaccatctcagcttgatcatcagcaccacaggaaaaagaaaaaggaagca 205
Query: 185 agagagggagggagggagggagg 207
|||||||||||||||||||||||
Sbjct: 204 agagagggagggagggagggagg 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_f10.g1 MSMg01no430_f10.g1 CHROMAT_FILE:
MSMg01no430_f10.g1 PHD_FILE: MSMg01no430_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:08 2005
(344 letters)
>mm_chr4_20238947_20239690
Length = 744
Score = 632 bits (327), Expect = 0.0
Identities = 340/345 (98%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 1 ataagaaagtttaaagaaggaattttctaccaaatgctacaaacagaagacaaatctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagaaagtttaaagaaggaattttctaccaaatgctacaaacagaagacaaatctttt 260
Query: 61 ttctctccccatcttgtatgagtattacccaaaaattttagcccccacaccaaataaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctctccccatcttgtatgagtattacccaaaaattttagcccccacaccaaataaagt 320
Query: 121 tctttctttttatttatttatttatttattttacacaaaggaaccctgttgtattctggg 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tctttctttttatttatttatttatttattttacacaaagaaaccctgttgtattctggg 380
Query: 181 aagttgatggcctagaacaatgagccctttcctcttgaggcagtaatgctttctatgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagttgatggcctagaacaatgagccctttcctcttgaggcagtaatgctttctatgtgg 440
Query: 241 gtcattatcattttcccctggaagcaatgacacctttct--ttctccttcctccattttc 298
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 441 gtcattatcattttcccctggaagcaatgacacttttctctttctccttcctccattttc 500
Query: 299 catatgccaattttaagacaatccaatcaactaagacattaaggg 343
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 catatgccagttttaagacaatccaatcaactaagacattaaggg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
