Query= MSMg01no431_i18.b1 MSMg01no431_i18.b1 CHROMAT_FILE:
MSMg01no431_i18.b1 PHD_FILE: MSMg01no431_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:54 2005
(370 letters)
>mm_chr4_131098295_131099064
Length = 770
Score = 545 bits (282), Expect = e-159
Identities = 297/302 (98%)
Strand = Plus / Minus
Query: 69 tcaacctgtgagtcgtgactgctttggaggcttggatgattctcgtacaggggtcgccta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tcaacctgtgagtcgtgactgctttggaggcttggatgattctcgtacaggggtcgccta 711
Query: 129 tcggatatttacattacgattcataacagcagcaaaattacagttctgaagtacaacaaa 188
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tcagatatttacattacgattcataacagcagcaaaattacagttctgaagtacaacaaa 651
Query: 189 ataattttatagtttggagttgccacagcacgaggaactgtattaaagggttgcagcatt 248
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 650 acaattttatagtttggagttgccacagcacgaggaactgtattaaagggctgcagcatt 591
Query: 249 tggaaggttgaaacacactggcataaagtgttttcagagggtgtgggttacagagatttc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tggaaggttgaaacacactggcataaagtgttttcagagggtgtgggttacagagatttc 531
Query: 309 ttaccatgtaacgatcctcctgtgtgcttccaagtatagtgttgaatttaaaaattcagt 368
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttaccatgtaatgatcctcctgtatgcttccaagtatagtgttgaatttaaaaattcagt 471
Query: 369 at 370
||
Sbjct: 470 at 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_i18.g1 MSMg01no431_i18.g1 CHROMAT_FILE:
MSMg01no431_i18.g1 PHD_FILE: MSMg01no431_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:54 2005
(408 letters)
>mm_chr4_130934926_130935733
Length = 808
Score = 737 bits (381), Expect = 0.0
Identities = 402/409 (98%), Gaps = 2/409 (0%)
Strand = Plus / Plus
Query: 1 tttaaatttgcatcctttgggggatcctgcccccctgttagtgaccagtgtgagggtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaatttgcatcctttgggggatcctgcccccctgttagtgaccagtgtgagggtcac 260
Query: 61 aggtagctgaatagagaggtgcctctgaagaggtgaagactagatcaacaggagctacgg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aggtagctgaatagagaggtgcctctgaagaggtgaagactagatcaataggagctacgg 320
Query: 121 agagcaagatttggggagaggccttggcaagcttcctaataagctcccagggctacaaac 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagcaagatatggggagaggccttggcaagcttcctaataagctcccagggctacaaac 380
Query: 181 agtgagtcaaagctgagatcatgtgtcctctctaagtcactagagccagagggagacttg 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtaagtcaaagctgagatcatgtgtcctctctaagtcactagagccagagggagacttg 440
Query: 241 accttccagtcatagaatgtagcctgttcccaccacagccacctctgcagctgacagcat 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 accttccagtcagagaatgtagcctgttcccaccacagccacctctgcagctgacaacat 500
Query: 301 caatatggggacatcaatagggacactcaactcatagatgatgtacagtagacagtggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatatggggacatcaatagggacactcaactcatagatgatgtacagtagacagtggac 560
Query: 361 agtgaagccatgagtgggcaggcttgtgggaa-cctgaccccagcgtgg 408
|||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 561 agtgaagccatgagtgggcaggcttg-gggaaacctgaccccagcgtgg 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
