AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTAAGTGACCCATGATTAGCAAGCCAGTAAGGAGCACCCTCCAGG
CCTCTGCATCAGCTCCTGCCTCCAGGTACCTGCTCTGTTTCAGTTTCTGT
CCTGAGTTCTCTTGCTGCTGAGCAGTGATAGAGAAATGTAAGACCGATAA
ATCCCTTCCTCCCCAAGTTGCTTTTTTGTCATGGTGTTTCATCTCATCAA
GAGAACCCTAACCAGAACAATAAGCATCCATGGTAATTCAGGTTAGTAAA
CTCTCCGTGGCTACCGACCACCTAAAACATGGCCAGTGAGATGTGAAAAT
GCATTTTTAATTTAATTTCAATCAACTTTAACTTAAAAACTGATACTCAT
TTCAATTACTGGAAAACAAAAATATGTATGTAACAAGTATTTATTCAGGT
ATAAATTTTATAAAATCAAAATGGAGGGAATCTACAAAAATAAAACCTTA
GTGTTTAAATTTAATTAAATTAAACATCTAAATATCTGCTAATTAAAATA
AATATATCAGATCTCAAAGGCTTGGTATGAAACATATATAATATATCATT
AACATATACTCACTACCTGTTAACATATTTTGGTTCCCTTTCCCCCTCTT
CATTAGACTCCACGTACTTCATATTTCCAAGGCATACCCAATTATTTCCC
TTCTTTCCCCTTCCTCCTCTCTCTCTTTTTTTTTTTTCCCCTTTTCCTCT
TTTTTCATCN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTGGCTTTTCAGACAGGGTCTCACTA
TGTAGCCTAGGCTTGCCCAGAACTCCAGCCTCCATCCTCTTGCCTCCTCC
AGAGTACAGCAATTAACCAAAATGTGACACTGTGCCAGGTCACATTTTTA
AAACAATGATTTATCTATTTTTATTTTATGTGCATGGGTGTTTTATGTTT
GCATGTTTATCAGTGTTGCAAGTGTTGGATCTTTTGGAATTTAAATTACA
GACAGTTTGAGGTACTATATTTATGCTGGGAATTGAACCTGGGTGCTCTG
GAAAAGCAGCCAGTGTTCTTAAGAGCTGAGCCATCTTCCCAGCCACCATG
ACAGAAATCTTAATATAAGGTAGTCGGTTCAAAATCAAAGTACACAGAAA
AATGGTGGAGCAGAAGAAAGGGAGTGGGAGGTCTTAAATCTGACATCCGC
TGACCTAGATTTGTTTATTACGCCCTTATCACCGCTACTCTTGATTTGCA
ATAACGCATAATATATTGTTTTCTTCTTTCTTCCCAATTTTACAGCTTAC
CCCCCTTTTTTTTTCCCCGCTCCTTCTTCTACACACTCCCCCACTTATTT
TGACTCTTTTTTTTTTTTTATTAGTCGTTTTTACACCCAATAATACCCTC
CCACAATTATACTTGTTTGTCCACTTCTCACGTCCACACACTACCTTTAA
CCTTTTCCTCCCCCCTATCTTCTTTTTTN

Query= MSMg01no435_g14.b1 MSMg01no435_g14.b1 CHROMAT_FILE:
MSMg01no435_g14.b1 PHD_FILE: MSMg01no435_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:08 2005
         (517 letters)



>mm_chr4_21560162_21561081
          Length = 920

 Score =  899 bits (465), Expect = 0.0
 Identities = 503/517 (97%), Gaps = 5/517 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctaagtgac-ccatgattagcaagccagtaaggagcaccctccaggcctctgc 63
           |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctaag-gaagccatgattagcaagccagtaaggagcaccctccaggcctctgc 263

                                                                       
Query: 64  atcagctcctgcctccaggtacctgctctgtttcagtttctgtcctgagttctcttgctg 123
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 atcagctcctgcctccaggtacctgctctgtttgagtttctgtcctgagttctcttgctg 323

                                                                       
Query: 124 ctgagcagtgatagagaaatgtaagaccgataaatcccttcctccccaagttgctttttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgagcagtgatagagaaatgtaagaccgataaatcccttcctccccaagttgctttttt 383

                                                                       
Query: 184 gtcatggtgtttcatctcatcaagagaaccctaaccagaacaataagcatccatggtaat 243
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcatggtgtttcatctcatcaatagaaccctaaccagaacaataagcatccatggtaat 443

                                                                       
Query: 244 tcaggttagtaaactctccgtggctaccgaccacctaaaacatggccagtgagatgtgaa 303
           ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaggttagtaaagtctccatggctaccgaccacctaaaacatggccagtgagatgtgaa 503

                                                                       
Query: 304 aatgcatttttaatttaatttcaatcaactttaacttaaaaactgatactcatttcaatt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatgcatttttaatttaatttcaatcaactttaacttaaaaactgatactcatttcaatt 563

                                                                       
Query: 364 actggaaaacaaaaatatgtatgtaacaa---gtatttattcaggtataaattttataaa 420
           ||||||||||| ||||||||||| |||||   ||||||||||||| ||||||||||||||
Sbjct: 564 actggaaaacataaatatgtatggaacaacaagtatttattcaggcataaattttataaa 623

                                                                       
Query: 421 atcaaaatggagggaatctacaaaaataaaaccttagtgtttaaatttaattaaattaaa 480
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcaaaatggagggaatctataaaaataaaaccttagtgtttaaatttaattaaattaaa 683

                                                
Query: 481 catctaaatatctgctaattaaaataaatatatcaga 517
           |||||||||||||||||||||||||||||||||||||
Sbjct: 684 catctaaatatctgctaattaaaataaatatatcaga 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 920
Length adjustment: 10
Effective length of query: 507
Effective length of database: 910
Effective search space:   461370
Effective search space used:   461370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)