Query= MSMg01no436_a09.b1 MSMg01no436_a09.b1 CHROMAT_FILE:
MSMg01no436_a09.b1 PHD_FILE: MSMg01no436_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:59 2005
(539 letters)
>mm_chr4_119717139_119718077
Length = 939
Score = 988 bits (511), Expect = 0.0
Identities = 532/539 (98%)
Strand = Plus / Minus
Query: 1 tggtgggggaaggggaccaggaaagcccacatccccgggggttggaaagcctggctgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tggtgggggaaggggaccaggaaagcccacatccccgggggttggaaagcctggctgtga 680
Query: 61 acagaaacagaagagaaacgagccagacatgatccacacgactgaggttcaccctgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acagaaacagaagagaaacgagccagacatgatccacacgactgaggttcaccctgggca 620
Query: 121 tgtggggtgactgagggcccatactgcaaggtgggagagacaggaggcgtggaaggggtg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtggggtgacagagggcccatactgcaaggtgggagagacaggaggcgtggaaggggtg 560
Query: 181 gctagatgacagccttctcttcacaatgacgaaaggagccttgaggctgtctaggtgaga 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 559 gctagatgacagccttctcttcacaatgaagaaaggagccttgaggctgtctaggtgaga 500
Query: 241 ggcatatgtgttctctgaacaagtggctctacgtgggtgacaccgcaggagagtggctga 300
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggcagatgggttctctgaacaagtggctctacgtgggtgacaccgcaggagagtggctga 440
Query: 301 cactgttgtaatcgccactgaatacttactaagtttgggaaaacactaagtggaaattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cactgttgtaatcgccactgaatacttactaagtttgggaaaacactaagtggaaattca 380
Query: 361 ggggtggaggaaggaccaacctccatggaggaagaaagaagacaggggagatgttcatgg 420
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 379 ggggtggaggaaggaccaacctccatggaggaaaaaagaagacgggggagatgttcatgg 320
Query: 421 ggcactcacaaggtgctaggcaccaggtgtgatgcccaccatgcctcagcaccacactaa 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 ggcactcacaaggtgctaggcaccaggtgtgatgcccaccatgactcagcaccacactaa 260
Query: 481 tcctatacatcagaggtttacttccttttcttctttctgtctttctttttaactgtctt 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcctatacatcagaggtttacttccttttcttctttctgtctttctttttaactgtctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_a09.g1 MSMg01no436_a09.g1 CHROMAT_FILE:
MSMg01no436_a09.g1 PHD_FILE: MSMg01no436_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:59 2005
(175 letters)
>mm_chr4_119561249_119561822
Length = 574
Score = 331 bits (171), Expect = 2e-95
Identities = 174/175 (99%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 1 tttctgtgttccactacacaatgggaaataatctccaagacccatagagcgggccagtga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tttctgtgttccactacacaatgggaaataatctccaagaccca-agagcgggccagtga 259
Query: 61 acaggagacaaaggacagcagcgaccctccagcgtggctgtggtccctccagtctctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acaggagacaaaggacagcagcgaccctccagcgtggctgtggtccctccagtctctctc 319
Query: 121 tgcatacactgcctttctgtccagtgctgtcaaaccattgtggcattctgttcat 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcatacactgcctttctgtccagtgctgtcaaaccattgtggcattctgttcat 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 574
Length adjustment: 8
Effective length of query: 167
Effective length of database: 566
Effective search space: 94522
Effective search space used: 94522
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
