Query= MSMg01no437_e04.b1 MSMg01no437_e04.b1 CHROMAT_FILE:
MSMg01no437_e04.b1 PHD_FILE: MSMg01no437_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:35 2005
(402 letters)
>mm_chr4_137754454_137755255
Length = 802
Score = 737 bits (381), Expect = 0.0
Identities = 392/397 (98%), Gaps = 4/397 (1%)
Strand = Plus / Plus
Query: 8 gaattcattcca--tttcctgtcacttgtatactatcccagataactttaattagcggca 65
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcattccacatt--ctgtcacttgtatactatcccagataactttaattagcggca 265
Query: 66 tgcagctactatgacatacatgggcttacattttcatggccttagtcttagagtctgcca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgcagctactatgacatacatgggcttacattttcatggccttagtcttagagtctgcca 325
Query: 126 tgtgtttagcctgtttgctgtgttctttaagtagcagtgcttttccatgaagagcactta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgtgtttagcctgtttgctgtgttctttaagtagcagtgcttttccatgaagagcactta 385
Query: 186 acatgctttttatgaggtcacagaagcagagttgaggctacctcttttaagtctctcttc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acatgctttttatgaggtcacagaagcagagttgaggctacctcttttaagtctctcttc 445
Query: 246 tgctcttctagaatctcccttagcccactgtgtatgtcagctgtgagctttaaccactcc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgctcttctagaatctcccttagcccactgtgtatgtcagctgtgagctttaaccactcc 505
Query: 306 aggcactgagaaatagagaccctggctttctccctgtctgtacagactaatcttttcttg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aggcactgagaaatagagaccctggctttctccctgtctgtacagactaatcttttcttg 565
Query: 366 aagtctttcgctctctcattttcaatcactgctagag 402
|||||||||| ||||||||||||||||||||||||||
Sbjct: 566 aagtctttcgttctctcattttcaatcactgctagag 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_e04.g1 MSMg01no437_e04.g1 CHROMAT_FILE:
MSMg01no437_e04.g1 PHD_FILE: MSMg01no437_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:35 2005
(365 letters)
>mm_chr4_137946895_137947659
Length = 765
Score = 667 bits (345), Expect = 0.0
Identities = 354/357 (99%)
Strand = Plus / Minus
Query: 9 aattcttgcttgtagcaccatgcctggcagatttttctcttcttaagtgatggaatttcc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aattcttgcttgtagcaccatgcctggcagatttttctcttcttaagtgatggaatttcc 506
Query: 69 tctgaatgttctagcctgaggcttgggcctgttggctgacccagccagagatgcattatg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctgaatgttctagcctgaggcttgggcctgttggctgacccagccagagatgcattatg 446
Query: 129 ggagcactttatgtatagcaataaagagtggcaagtgttgcccctagtgagtctggcaac 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggagcactttatgtatagcaataaagagtggcaagtgttgcccctagtgagtctggcaac 386
Query: 189 aaaactctcctgggaactgtggggcctaaatctatctctcctgattgctccagaggggct 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaactctcctgggaactgtggggcctaaatctatctctcctgattgctccagaggggct 326
Query: 249 gaccagtgatttatgtgacatgccatgttcatagctcaatacatagtcagcgtgccaacc 308
|||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 gaccagtgatcaatgtgacatgccatgttcatagctcaatacatagtcagcgggccaacc 266
Query: 309 agccagccatcttggctcccaggtgtgtgctcacatagtgctccctggttttccatg 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agccagccatcttggctcccaggtgtgtgctcacatagtgctccctggttttccatg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
