NNNGGGGTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCANAA
ATCCGCGGAATTCTTAGAACTTTCATGGACCCTTTANAAGGCTTATAATG
ACTTANTAATAAGTCTTAAGTCATCACAGATTANAAAAAAATATGGAAGT
TAATATGTGACAGTAGAATACAAAGTGAATNGGGATNAGTAGCCTGCCCA
CTNAATGTGGGGCGGAGGGGGGGGGGGGTGAGGGGGAACAAAAAATTTGA
GNNNNAACAATATTTATTTGNNNNNNGTATTCCTAAAAAANNNNAAANNC
ATCATTTNNNNNAAACCTTNNNNTTTTTATCNNNCACAAAAAAAAAAAAC
TGTTTTTGTTTAAAGGGNNACTANANNATTTTTNNNCTCTTTAAAATATT
CCCTATANNCCGAAAAAAAAAAAAATAGTGCTCTTTAAAAAAAAAGCTTC
TTNNNAAATTATAAAAAAAACCCCCCAAAGCCCCCCCCCTTTATTATTAT
GAAAGAAAGGGGGCGCGGGGGGGGGGCTAAAAAAAAAAACCCCCCCCTCC
TTTTTCTATTATATATCATTTTATCTAAAAATTTATAAAAACCACCCCCT
CCTTTCTGAGAGGCCGGCGGCCTAAANAAANTTAATTTTTCTTTATTTCT
CTCCACTTTCCTTTCCCACCTCCCTTCACCATCCCCCTCATTCCCTCCTC
TTTTCCCACACTCCTTCAATCATCTATCCCCCCACCTATACACTTCCCTT
CCCTTCTTTCCACTTCTTCTTCTCCCCCTCTTCTTTCTTGTT

NNTTCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTATACCAGAACTTTTACC
ACCCTATTTCCTGCCTAAGCTAATAGACCAACAGCAATTTTATTGGCGGG
TTATTCTTCCATATAGTACAAAGGACTTTTTATACACTCCAGAGGAGGTA
TAAATGTGAAATCCCCCAAAGGGCCTCTGTCTGCTTCTACCTTTGTTGCT
GCTTGTTATTACTGCTATTTTTGTTATTGTTGGATTTCTGGATTGTTGGA
TTGCAAAATTTCTAGATTCCTAGAATGTTTTGTTGCTGGATTGCTCTTAG
CTAGATTGTGGTTGGGGATTGGAGATATTCTGACAATAAAAATTGTACTT
TATCCCAAGGAACTTGACACCACAATCAGCAGGAATTAGTCAAAAGAGGT
CTATACACCACTTCCCCACTAGCCTTATCACTCTACCAAATGTTGGGGTT
GGAAGGGATAATGGTGGAATAAAAATTGGAAGGTTGNTANNTNNANNATT
TATTTTGTTTTGTTATGTAGGATTTTGTGTTTTAATTTTTGGATATTTTT
TTTGAATAGTTAAATTAATTTTTTTTTTTTATTATTATTATATTTATAAT
TAATTATAGATTTTTTTTTTTTTTTTTAATAGTATATAGCTCTATACTTA
TATGATTTTCATTATTTATTCTTTATTCATTTTTTCTTTN

Query= MSMg01no440_i11.g1 MSMg01no440_i11.g1 CHROMAT_FILE:
MSMg01no440_i11.g1 PHD_FILE: MSMg01no440_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:01 2005
         (448 letters)



>mm_chr4_112376257_112377104
          Length = 848

 Score =  804 bits (416), Expect = 0.0
 Identities = 440/448 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgtataccagaacttttaccaccctatttcctgcctaagctaatagaccaacagcaat 60
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtataccagaacttctaccaccctatttcctgcctaagctaatagaccaacagcaat 260

                                                                       
Query: 61  tttattggcgggttattcttccatatagtacaaaggactttttatacactccagaggagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttattggcgggttattcttccatatagtacaaaggactttttatacactccagaggagg 320

                                                                       
Query: 121 tataaatgtgaaatcccccaaagggcctctgtctgcttctacctttgttgctgcttgtta 180
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 321 tataaatgtgaaatcccccaaagggcctctgtctgcttctacctctgctgctgcttgtta 380

                                                                       
Query: 181 ttactgctatttttgttattgttggatttctggattgttggattgcaaaatttctagatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttactgctatttttgttattgttggatttctggattgttggattgcaaaatttctagatt 440

                                                                       
Query: 241 cctagaatgttttgttgctggattgctcttagctagattgtggttggggattggagatat 300
           ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 cctagaatgttgtgttgctggattgctcttagctagattgtggttgtggattggagatat 500

                                                                       
Query: 301 tctgacaataaaaattgtactttatcccaaggaacttgacaccacaatcagcaggaatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgacaataaaaattgtactttatcccaaggaacttgacaccacaatcagcaggaatta 560

                                                                       
Query: 361 gtcaaaagaggtctatacaccacttccccactagccttatcactctaccaaatgttgggg 420
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| 
Sbjct: 561 gtcaaaagaggtctatacaccacttccccactagccttattgctctaccaaatgttgggt 620

                                       
Query: 421 ttggaagggataatggtggaataaaaat 448
           ||||||||||||||||||||||||||||
Sbjct: 621 ttggaagggataatggtggaataaaaat 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space:   367044
Effective search space used:   367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)