NNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAAGAAGTTACACTCCAGAGACCCAAATAACCCTATTTTTAAA
ATGGGGAATAGAGCTAACCAGAGAACTTTCAACAGAGGAACCTTGAAGGG
CTGAGAAGCACCTAAAAAAATATTCAACATCCTTAGTCATCAGGGAAATG
CAAATCAAAATGACCCTGAGATTCTACCTCACAGCAGTCAGAGTGGCCAA
GGTCAAAAACTCAGGTGACAGCAGATGCTGGCAGGGATGTGGAGAAAGAG
CACTCCTTCATTGTTGATGGGATTGCAAGCTGGCAAAAGCACTCTGGAAA
TCATTTTGGCGGTTCCTCAGAAATTTGGACATAGTACTACCTGAGGCTCC
AGCAATACCACTTCTGGGCATATACCCAGAAGGTGCTCCAACATGTAATA
AGGACACATGCTCCACTATGTTCATAGTTATAATAGTCAGAAGCTAGAAA
CAACCGAGATGTCTCTCAACAGAGGAATGGATACAGAAAATGTGGCACGT
TTACACAATGGGATACTACTCAGCTAGTAAAAACAATGACTTCATGAAAT
TCGCAGGCAAATGGACTTGAAAATATAATCCTGAATGAGGTAAATCAGCC
GGGCAGTGGTGGCACATGCCCTTAAACTCTGCACTTGGGAGGCAGAGACA
GGTGGATTTCTGAGTTCTGAGGCATCCTGGTCTACCGAATGAGTTCCA

NCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATTTCAAGCCAAGTATCCA
GATGTTATAGTGGTACTGGTCAGAAGTTTACACTTGAGAGCCATGGCTTT
TATTCAGAGGAGCATCAAACCAATGTAAAGAATAAAGGACTTATGACAGT
TCTTATTAAAAGCACCTTGCAGTTGCCCTTATGAGCCTCAAACTATGCTG
TTTTCATTTAATTAATAAAAAGTCAGTATGAAGGGTCTAAGTAAAATGAA
CGGGCCCAGGACAATACCTGTATGTGTGCTTTCTGAAGGCTGCACTGATA
AATGACTTTTGAAGATTTTTACTTCCTTGTATAGATTCCTGAATCTTACT
TATTACAGCACAATAGTTAGAAACAGAAAGACAAACCCAACCCCAATTCC
AGTTCACCATCCCTAGGCCTCATTGATAGAACAGAAAAAAATAATAGTGC
CTTCTTCCTCCAGTCAGTAGATCAACTCCAGCATATGGAACAGGCCAAGT
AAACATTTGCTATAAATAAGTATTAGCATCTCTTCTGTATAGCCCCCAAG
AGGCCTCTCCAATATTGTGCAAGACTTCCACCTCTGTCAAAGTGTCTTCT
ATTGACTGCAAATTGCCTCAGAGCTGTATATCATTAACAGGACTGTCTAC
AAAAGTAAATTTCCTCTTGCTATTCAGCCCCTGTCCTGGATACTCTTGTC
C

Query= MSMg01no441_e06.g1 MSMg01no441_e06.g1 CHROMAT_FILE:
MSMg01no441_e06.g1 PHD_FILE: MSMg01no441_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:59 2005
         (647 letters)



>mm_chr4_19180784_19181830
          Length = 1047

 Score = 1191 bits (616), Expect = 0.0
 Identities = 637/644 (98%), Gaps = 2/644 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatttcaagccaagtatccagatgttatagtggtactggtcagaagtttacacttgaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatttcaagccaagtatccagatgttatagtggtactggtcagaagtttacacttgaga 260

                                                                       
Query: 61  gccatggcttttattcagaggagcatcaaaccaatgtaaagaataaaggacttatgacag 120
           |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 261 gccacggcttttattcagaggagcgtcaaaccaatgtaaagaataaagaacttatgacag 320

                                                                       
Query: 121 ttcttattaaaagcaccttgcagttgcccttatgagcctcaaactatgctgttttcattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttattaaaagcaccttgcagttgcccttatgagcctcaaactatgctgttttcattt 380

                                                                       
Query: 181 aattaataaaaagtcagtatgaagggtctaagtaaaatgaacgggcccaggacaatacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattaataaaaagtcagtatgaagggtctaagtaaaatgaacgggcccaggacaatacct 440

                                                                       
Query: 241 gtatgtgtgctttctgaaggctgcactgataaatgacttttgaagatttttacttccttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatgtgtgctttctgaaggctgcactgataaatgacttttgaagatttttacttccttg 500

                                                                       
Query: 301 tatagattcctgaatcttacttattacagcacaatagttagaaacagaaagacaaaccca 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagattcctgaaccttacttattacagcacaatagttagaaacagaaagacaaaccca 560

                                                                       
Query: 361 accccaattccagttcaccatccctaggcctcattgatagaacagaaaaaaataatagtg 420
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accccaatgccagttcaccatccctaggcctcattgatagaacagaaaaaaataatagtg 620

                                                                       
Query: 421 ccttcttcctccagtcagtagatcaactccagcatatggaacaggccaagtaaacatttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttcttcctccagtcagtagatcaactccagcatatggaacaggccaagtaaacatttg 680

                                                                       
Query: 481 ctataaataagtattagcatctcttctgtatagcccccaagaggcctctccaatattgtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctataaataagtattagcatctcttctgtatagcccccaagaggcctctccaatattgtg 740

                                                                       
Query: 541 caagacttccacctctgtcaaagtgtcttctattgactgcaaattgcctcagagctg-ta 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 741 caagacttccacctctgtcaaagtgtcttctattgactgcaaattgcctcagag-tggta 799

                                                       
Query: 600 tatcattaacaggactgtctacaaaagtaaatttcctcttgcta 643
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tatcattaacaggactgtctacaaaagtaaatttcctcttgcta 843


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)